RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA811725" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA811725 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28633526 28633526 PRJNA811725_P_NODE_2987_length_803_cov_6.227397_g2787_i0 PRJNA811725 2987 803 6.227397 50.00599791 Medioppia subpectinata 1979941 Arthropoda Arthropoda 74.3 4.05e-11   NR CAD7642207.1 1979941 g2787 i0 30.8 0.777085927770859 104 72 38.9 0 667 356 121 224 CAD7642207.1 unnamed protein product [Medioppia subpectinata] diamond 624 74.3 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Oppiidae Medioppia Medioppia subpectinata
31002239 31002239 PRJNA811725_P_NODE_9954_length_471_cov_1.389447_g9710_i0 PRJNA811725 9954 471 1.389447 6.54429537 Polyplax serrata 468196 Arthropoda Arthropoda 58.9 9.63e-7   NR KAK6626563.1 468196 g9710 i0 49.3 0.904458598726115 69 31 43.9 2 459 253 188 252 KAK6626563.1 hypothetical protein RUM44_009037 [Polyplax serrata] diamond 426 58.9 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Psocodea Polyplacidae Polyplax Polyplax serrata
31453682 31453682 PRJNA811725_P_NODE_22016_length_323_cov_1.264000_g21770_i0 PRJNA811725 22016 323 1.264 4.08272 Eriophyidae 70320 Arthropoda Arthropoda 130 7.99e-34   NR YP_009228530.1 1452570 g21770 i0 69.7 2.47987616099071 89 27 82.7 0 53 319 163 251 YP_009228530.1 cytochrome b [Epitrimerus sabinae] diamond 801 130 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Trombidiformes Eriophyidae Epitrimerus Epitrimerus sabinae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;