RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA811237" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA811237 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8461882 8461882 PRJNA811237_S_NODE_6267_length_295_cov_1.101626_g6027_i0 PRJNA811237 6267 295 1.101626 3.2497967 Fidelibacterota bacterium 2026760 Bacteria Bacteria 151 5.5e-40   NR MBT3589382.1 2026760 g6027 i0 74.7 8.00338983050847 99 24 99.7 1 2 295 795 893 MBT3589382.1 aminomethyl-transferring glycine dehydrogenase [Fidelibacterota bacterium] diamond 2361 151 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27054313 27054313 PRJNA811237_S_NODE_11842_length_228_cov_1.418994_g11602_i0 PRJNA811237 11842 228 1.418994 3.23530632 Fidelibacterota bacterium 2026760 Bacteria Bacteria 96.7 2.29e-21   NR HDP67343.1 2026760 g11602 i0 55.4 3.89473684210526 74 33 97.4 0 2 223 165 238 HDP67343.1 aspartate aminotransferase family protein [Fidelibacterota bacterium] diamond 888 96.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31634377 31634377 PRJNA811237_S_NODE_12576_length_223_cov_1.982759_g12336_i0 PRJNA811237 12576 223 1.982759 4.42155257 Fidelibacterota bacterium 2026760 Bacteria Bacteria 95.1 9.22e-21   NR MBD67617.1 2026760 g12336 i0 54.8 5.86547085201794 73 33 98.2 0 3 221 104 176 MBD67617.1 hypothetical protein [Fidelibacterota bacterium] diamond 1308 95.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;