RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA811237" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA811237 · 5 ✖

analysis 1

  • diamond · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29052711 29052711 PRJNA811237_S_NODE_7828_length_267_cov_3.362385_g7588_i0 PRJNA811237 7828 267 3.362385 8.97756795 root 1 Root_unresolved Root_unresolved 153 5.42e-45   NR EPZ35492.1 988480 g7588 i0 88.1 14.2022471910112 84 10 94.4 0 14 265 1 84 EPZ35492.1 60S ribosomal protein L15 [Rozella allomycis CSF55] diamond 3792 153 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30686006 30686006 PRJNA811237_S_NODE_16573_length_203_cov_0.993506_g16333_i0 PRJNA811237 16573 203 0.993506 2.01681718 Rozella allomycis CSF55 988480 Fungi Fungi 71.2 1.95e-12   NR EPZ35674.1 988480 g16333 i0 60 0.738916256157635 50 20 73.9 0 52 201 59 108 EPZ35674.1 Kinesin, motor region domain-containing protein [Rozella allomycis CSF55] diamond 150 71.2 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31792407 31792407 PRJNA811237_S_NODE_10737_length_236_cov_2.181818_g10497_i0 PRJNA811237 10737 236 2.181818 5.14909048 Rozella allomycis CSF55 988480 Fungi Fungi 70.9 1.13e-13   NR RKP20267.1 988480 g10497 i0 44.8 2.78389830508475 67 35 85.2 1 235 35 26 90 RKP20267.1 kinase-like protein, partial [Rozella allomycis CSF55] diamond 657 70.9 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32045848 32045848 PRJNA811237_S_NODE_31358_length_164_cov_0.886957_g31118_i0 PRJNA811237 31358 164 0.886957 1.45460948 Rozella allomycis CSF55 988480 Fungi Fungi 55.5 4.12e-7   NR EPZ34706.1 988480 g31118 i0 63.6 1.20731707317073 33 12 60.4 0 2 100 560 592 EPZ34706.1 Zinc finger, RING-type domain-containing protein [Rozella allomycis CSF55] diamond 198 55.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32677757 32677757 PRJNA811237_S_NODE_10960_length_234_cov_11.070270_g10720_i0 PRJNA811237 10960 234 11.07027 25.9044318 Rozella allomycis CSF55 988480 Fungi Fungi 81.6 1.26e-16   NR EPZ34692.1 988480 g10720 i0 66.2 4.02564102564103 65 21 82.1 1 18 209 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 81.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;