RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA807836" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 7 ✖

bioproject 1

  • PRJNA807836 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27496680 27496680 PRJNA807836_S_NODE_24283_length_271_cov_2.181818_g24007_i0 PRJNA807836 24283 271 2.181818 5.91272678 Goldenrod fern yue-like virus 2933170 Viruses Viruses 139 6.13e-36   NR CAI5383876.1 2933170 g24007 i0 71.1 0.996309963099631 90 26 99.6 0 2 271 530 619 CAI5383876.1 RNA-dependent RNA polymerase, partial [Goldenrod fern yue-like virus] diamond 270 139 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Goldenrod fern yue-like virus
28412322 28412322 PRJNA807836_S_NODE_7066_length_605_cov_1.892857_g6805_i0 PRJNA807836 7066 605 1.892857 11.45178485 Indivirus ILV1 1977633 Viruses Viruses 48.5 0.0075   NR ARF10000.1 1977633 g6805 i0 27.5 0.862809917355372 120 77 59 4 218 574 138 248 ARF10000.1 serine/threonine protein kinase [Indivirus ILV1] diamond 522 48.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Indivirus Indivirus ILV1
28507037 28507037 PRJNA807836_S_NODE_29607_length_245_cov_0.889535_g29331_i0 PRJNA807836 29607 245 0.889535 2.17936075 Rose yellow vein virus 1213588 Viruses Viruses 60.1 2.97e-8   NR YP_007761644.1 1213588 g29331 i0 38.8 0.979591836734694 80 47 98 2 5 244 261 338 YP_007761644.1 reverse transcriptase [Rose yellow vein virus] diamond 240 60.1 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Rosadnavirus Rosadnavirus venarosae
31634367 31634367 PRJNA807836_S_NODE_6376_length_649_cov_2.092014_g6119_i0 PRJNA807836 6376 649 2.092014 13.57717086 Goldenrod fern yue-like virus 2933170 Viruses Viruses 226 2.7500000000000003e-64   NR CAI5383876.1 2933170 g6119 i0 54.8 0.970724191063174 210 87 93.4 2 646 41 882 1091 CAI5383876.1 RNA-dependent RNA polymerase, partial [Goldenrod fern yue-like virus] diamond 630 226 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Goldenrod fern yue-like virus
32045806 32045806 PRJNA807836_S_NODE_31078_length_241_cov_0.916667_g30802_i0 PRJNA807836 31078 241 0.916667 2.20916747 Goldenrod fern yue-like virus 2933170 Viruses Viruses 103 1.4599999999999995e-23   NR CAI5383876.1 2933170 g30802 i0 66.3 0.995850622406639 80 27 99.6 0 1 240 315 394 CAI5383876.1 RNA-dependent RNA polymerase, partial [Goldenrod fern yue-like virus] diamond 240 103 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Goldenrod fern yue-like virus
32172470 32172470 PRJNA807836_S_NODE_22358_length_286_cov_0.859155_g22082_i0 PRJNA807836 22358 286 0.859155 2.4571833 Viola yellow mottle virus 2922803 Viruses Viruses 94.7 3.29e-20   NR UML14526.1 2922803 g22082 i0 51.2 0.881118881118881 84 41 88.1 0 12 263 286 369 UML14526.1 polymerase [Viola yellow mottle virus] diamond 252 94.7 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Rosadnavirus Rosadnavirus maculaviolae
32741077 32741077 PRJNA807836_S_NODE_30180_length_243_cov_1.352941_g29904_i0 PRJNA807836 30180 243 1.352941 3.28764663 Goldenrod fern yue-like virus 2933170 Viruses Viruses 140 1.66e-36   NR CAI5383876.1 2933170 g29904 i0 80.2 1 81 16 100 0 243 1 794 874 CAI5383876.1 RNA-dependent RNA polymerase, partial [Goldenrod fern yue-like virus] diamond 243 140 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Goldenrod fern yue-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;