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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA807836" and tax_kingdom = "Bacillati"

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tax_superkingdom 1

tax_kingdom 1

  • Bacillati · 11 ✖

bioproject 1

  • PRJNA807836 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6326971 6326971 PRJNA807836_S_NODE_26645_length_255_cov_1.263736_g26369_i0 PRJNA807836 26645 255 1.263736 3.2225268 Candidatus Phytoplasma australasiaticum 2754999 Bacteria Bacteria 125 3.4799999999999993e-31   NR MDV3176183.1 101513 g26369 i0 67.5 0.941176470588235 80 26 94.1 0 241 2 1577 1656 MDV3176183.1 reverse transcriptase domain-containing protein [Candidatus Phytoplasma australasiaticum subsp. ipomoeae] diamond 240 125 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Candidatus Phytoplasma Candidatus Phytoplasma australasiaticum
27938734 27938734 PRJNA807836_S_NODE_28445_length_248_cov_0.880000_g28169_i0 PRJNA807836 28445 248 0.88 2.1824 Pseudoglutamicibacter cumminsii 156979 Bacteria Bacteria 124 6.509999999999999e-31   NR WP_146191945.1 156979 g28169 i0 76.8 0.991935483870968 82 19 99.2 0 248 3 192 273 WP_146191945.1 hypothetical protein, partial [Pseudoglutamicibacter cumminsii] diamond 246 124 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Micrococcaceae Pseudoglutamicibacter Pseudoglutamicibacter cumminsii
29106965 29106965 PRJNA807836_S_NODE_23728_length_275_cov_3.039604_g23452_i0 PRJNA807836 23728 275 3.039604 8.358911 Chloroflexota bacterium 2026724 Bacteria Bacteria 44.3 0.0149   NR PZC44690.1 2026724 g23452 i0 33.8 0.774545454545455 71 40 74.2 2 70 273 118 184 PZC44690.1 MAG: Nucleoside-diphosphate-sugar epimerase [Chloroflexota bacterium] diamond 213 44.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29296312 29296312 PRJNA807836_S_NODE_29989_length_244_cov_0.900585_g29713_i0 PRJNA807836 29989 244 0.900585 2.1974274 unclassified Veillonella 2630086 Bacteria Bacteria 160 6.819999999999998e-47   NR WP_009352911.1 2630086 g29713 i0 100 0.995901639344262 81 0 99.6 0 243 1 154 234 WP_009352911.1 MULTISPECIES: ABC transporter permease [unclassified Veillonella] diamond 243 160 1 Bacteria   Bacillati Bacillota Negativicutes Veillonellales Veillonellaceae Veillonella  
29359533 29359533 PRJNA807836_S_NODE_10089_length_475_cov_1.149254_g9813_i0 PRJNA807836 10089 475 1.149254 5.4589565 Candidatus Phytoplasma australasiaticum 2754999 Bacteria Bacteria 121 1.9299999999999999e-28   NR MDV3176183.1 101513 g9813 i0 49.1 0.694736842105263 110 56 69.5 0 472 143 1730 1839 MDV3176183.1 reverse transcriptase domain-containing protein [Candidatus Phytoplasma australasiaticum subsp. ipomoeae] diamond 330 121 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Candidatus Phytoplasma Candidatus Phytoplasma australasiaticum
29896366 29896366 PRJNA807836_S_NODE_29971_length_244_cov_0.900585_g29695_i0 PRJNA807836 29971 244 0.900585 2.1974274 Anaerolineales bacterium 2073117 Bacteria Bacteria 43.5 0.0195   NR NOR90439.1 2073117 g29695 i0 43.3 0.737704918032787 60 30 71.3 2 186 13 282 339 NOR90439.1 GNAT family N-acetyltransferase [Anaerolineales bacterium] diamond 180 43.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
30402220 30402220 PRJNA807836_S_NODE_24693_length_268_cov_2.364103_g24417_i0 PRJNA807836 24693 268 2.364103 6.33579604 Bacillota bacterium 1879010 Bacteria Bacteria 43.9 0.0161   NR MCL5780781.1 1879010 g24417 i0 36.1 1.36567164179104 61 38 67.2 1 235 56 30 90 MCL5780781.1 archaetidylserine decarboxylase [Bacillota bacterium] diamond 366 43.9 1 Bacteria   Bacillati Bacillota         Bacillota bacterium
30717605 30717605 PRJNA807836_S_NODE_25274_length_264_cov_1.869110_g24998_i0 PRJNA807836 25274 264 1.86911 4.9344504 Polymorphospora rubra 338584 Bacteria Bacteria 43.9 0.0182   NR WP_212820799.1 338584 g24998 i0 41.7 0.545454545454545 48 28 54.5 0 80 223 273 320 WP_212820799.1 phosphoribosyltransferase family protein [Polymorphospora rubra] diamond 144 43.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micromonosporales Micromonosporaceae Polymorphospora Polymorphospora rubra
30875683 30875683 PRJNA807836_S_NODE_29594_length_245_cov_0.895349_g29318_i0 PRJNA807836 29594 245 0.895349 2.19360505 Candidatus Dormiibacterota bacterium 2052315 Bacteria Bacteria 44.3 0.00957   NR HYM84378.1 2052315 g29318 i0 51 0.624489795918367 51 18 62.4 2 66 218 181 224 HYM84378.1 FGGY family carbohydrate kinase [Candidatus Dormiibacterota bacterium] diamond 153 44.3 1 Bacteria   Bacillati Candidatus Dormiibacterota         Candidatus Dormiibacterota bacterium
31643130 31643130 PRJNA807836_S_NODE_30016_length_244_cov_0.900585_g29740_i0 PRJNA807836 30016 244 0.900585 2.1974274 Massilimicrobiota 1924110 Bacteria Bacteria 44.7 0.00741   NR WP_162607616.1 1776392 g29740 i0 42.5 1.79508196721311 73 34 83.6 3 212 9 74 143 WP_162607616.1 MFS transporter [Massilimicrobiota timonensis] diamond 438 45.1 0.991130820399113 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Massilimicrobiota Massilimicrobiota timonensis
31855786 31855786 PRJNA807836_S_NODE_26737_length_254_cov_1.690608_g26461_i0 PRJNA807836 26737 254 1.6906080000000001 4.29414432 Janibacter melonis 262209 Bacteria Bacteria 42.7 0.0295   NR WP_123092332.1 262209 g26461 i0 40 0.590551181102362 50 30 59.1 0 171 22 74 123 WP_123092332.1 helix-turn-helix domain-containing protein [Janibacter melonis] diamond 150 42.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Intrasporangiaceae Janibacter Janibacter melonis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;