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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA807685" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA807685 · 29 ✖

analysis 1

  • diamond · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11010634 11010634 PRJNA807685_P_NODE_65709_length_152_cov_1.460870_g64636_i0 PRJNA807685 65709 152 1.46087 2.2205224 Scyliorhinus torazame 75743 Chordata Chordata 59.7 7.04e-10   NR GCB78337.1 75743 g64636 i0 54.2 0.947368421052632 48 20 94.7 1 149 6 26 71 GCB78337.1 hypothetical protein [Scyliorhinus torazame] diamond 144 59.7 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Carcharhiniformes Scyliorhinidae Scyliorhinus Scyliorhinus torazame
26651276 26651276 PRJNA807685_P_NODE_30081_length_234_cov_1.172589_g29008_i0 PRJNA807685 30081 234 1.172589 2.74385826 Mammalia 40674 Chordata Chordata 101 8.249999999999999e-23   NR EFB23870.1 9646 g29008 i0 69.7 5.92307692307692 66 20 84.6 0 2 199 585 650 EFB23870.1 hypothetical protein PANDA_020757 [Ailuropoda melanoleuca] diamond 1386 101 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Ursidae Ailuropoda Ailuropoda melanoleuca
26737236 26737236 PRJNA807685_P_NODE_56861_length_162_cov_1.776000_g55788_i0 PRJNA807685 56861 162 1.776 2.87712 Pteronotus mesoamericanus 1884717 Chordata Chordata 46.2 7.26e-4   NR XP_054422709.1 1884717 g55788 i0 50 0.777777777777778 42 20 75.9 1 12 134 248 289 XP_054422709.1 transmembrane protease serine 11D-like, partial [Pteronotus mesoamericanus] diamond 126 46.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Mormoopidae Pteronotus Pteronotus mesoamericanus
26769306 26769306 PRJNA807685_P_NODE_57141_length_162_cov_1.240000_g56068_i0 PRJNA807685 57141 162 1.24 2.0088 Strigops habroptila 2489341 Chordata Chordata 42 0.0145   NR XP_030366981.1 2489341 g56068 i0 38.3 1.11111111111111 60 30 98.1 1 160 2 40 99 XP_030366981.1 programmed cell death protein 5-like [Strigops habroptila] diamond 180 42 1 Eukaryota Opisthokonta Metazoa Chordata Aves Psittaciformes Psittacidae Strigops Strigops habroptila
26927603 26927603 PRJNA807685_P_NODE_32662_length_221_cov_1.467391_g31589_i0 PRJNA807685 32662 221 1.467391 3.24293411 Galemys pyrenaicus 202257 Chordata Chordata 101 7.009999999999999e-23   NR KAG8523499.1 202257 g31589 i0 63 0.990950226244344 73 27 99.1 0 2 220 514 586 KAG8523499.1 Insulin-degrading enzyme [Galemys pyrenaicus] diamond 219 101 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Talpidae Galemys Galemys pyrenaicus
26927612 26927612 PRJNA807685_P_NODE_45302_length_181_cov_4.270833_g44229_i0 PRJNA807685 45302 181 4.270833 7.73020773 Pterocles gutturalis 240206 Chordata Chordata 47.8 2.78e-4   NR XP_010072682.1 240206 g44229 i0 50 0.662983425414365 40 20 66.3 0 180 61 255 294 XP_010072682.1 PREDICTED: zinc finger and SCAN domain-containing protein 32-like, partial [Pterocles gutturalis] diamond 120 47.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Pterocliformes Pteroclidae Pterocles Pterocles gutturalis
27180379 27180379 PRJNA807685_P_NODE_61902_length_156_cov_1.453782_g60829_i0 PRJNA807685 61902 156 1.453782 2.26789992 Odocoileus virginianus 9874 Chordata Chordata 52.8 3.41e-6   NR XP_070319697.1 9874 g60829 i0 45.6 1.30769230769231 68 8 75 1 117 1 1700 1767 XP_070319697.1 LOW QUALITY PROTEIN: ciliary rootlet coiled-coil protein 2 [Odocoileus virginianus] diamond 204 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
27528096 27528096 PRJNA807685_P_NODE_36943_length_204_cov_1.167665_g35870_i0 PRJNA807685 36943 204 1.167665 2.3820366 Rhinopomastus cyanomelas 113115 Chordata Chordata 45.1 2.73e-4   NR NXO00803.1 113115 g35870 i0 47.2 1.70588235294118 36 19 52.9 0 204 97 11 46 NXO00803.1 ZN274 factor [Rhinopomastus cyanomelas] diamond 348 45.1 1 Eukaryota Opisthokonta Metazoa Chordata Aves Bucerotiformes Rhinopomastidae Rhinopomastus Rhinopomastus cyanomelas
28254265 28254265 PRJNA807685_P_NODE_20946_length_303_cov_1.436090_g19873_i0 PRJNA807685 20946 303 1.43609 4.3513527 Branchiostoma belcheri 7741 Chordata Chordata 43.9 0.0287   NR XP_019647468.1 7741 g19873 i0 42.9 0.554455445544555 56 31 55.4 1 110 277 36 90 XP_019647468.1 PREDICTED: uncharacterized protein LOC109487824 [Branchiostoma belcheri] diamond 168 43.9 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
28294702 28294702 PRJNA807685_P_NODE_25946_length_259_cov_2.324324_g24873_i0 PRJNA807685 25946 259 2.324324 6.01999916 Metazoa 33208 Chordata Chordata 96.3 6.83e-21   NR XP_067954409.1 7769 g24873 i0 60.3 3.94980694980695 68 26 78.8 1 250 47 782 848 XP_067954409.1 uncharacterized protein [Myxine glutinosa] diamond 1023 96.3 1 Eukaryota Opisthokonta Metazoa Chordata Myxini Myxiniformes Myxinidae Myxine Myxine glutinosa
28633433 28633433 PRJNA807685_P_NODE_47907_length_176_cov_2.237410_g46834_i0 PRJNA807685 47907 176 2.23741 3.9378416 Ranitomeya imitator 111125 Chordata Chordata 50.1 3.88e-5   NR CAJ0930033.1 111125 g46834 i0 54.3 2.98295454545455 35 16 59.7 0 2 106 124 158 CAJ0930033.1 unnamed protein product [Ranitomeya imitator] diamond 525 50.4 0.994047619047619 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
28768303 28768303 PRJNA807685_P_NODE_42207_length_189_cov_1.006579_g41134_i0 PRJNA807685 42207 189 1.006579 1.90243431 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.3 1.46e-6   NR XP_042331344.1 8520 g41134 i0 50 3.58730158730159 48 24 76.2 0 181 38 288 335 XP_042331344.1 prostatic acid phosphatase-like [Sceloporus undulatus] diamond 678 54.3 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Phrynosomatidae Sceloporus Sceloporus undulatus
28854078 28854078 PRJNA807685_P_NODE_50288_length_172_cov_1.674074_g49215_i0 PRJNA807685 50288 172 1.674074 2.87940728 Myotis myotis 51298 Chordata Chordata 58.2 2.16e-8   NR KAF6330375.1 51298 g49215 i0 66.7 31.0116279069767 36 10 59.3 1 149 48 137 172 KAF6330375.1 hypothetical protein mMyoMyo1_012365 [Myotis myotis] diamond 5334 58.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Vespertilionidae Myotis Myotis myotis
29075454 29075454 PRJNA807685_P_NODE_54728_length_165_cov_1.507812_g53655_i0 PRJNA807685 54728 165 1.507812 2.4878898 Clavelina lepadiformis 159417 Chordata Chordata 62.8 7.07e-10   NR CAK8677936.1 159417 g53655 i0 49.1 1 55 27 98.2 1 2 163 34 88 CAK8677936.1 unnamed protein product [Clavelina lepadiformis] diamond 165 62.8 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Aplousobranchia Clavelinidae Clavelina Clavelina lepadiformis
29075463 29075463 PRJNA807685_P_NODE_67608_length_150_cov_1.805310_g66535_i0 PRJNA807685 67608 150 1.80531 2.707965 Erinaceus europaeus 9365 Chordata Chordata 74.7 5.66e-14   NR XP_060052882.1 9365 g66535 i0 65.3 2.5 49 17 98 0 147 1 15 63 XP_060052882.1 ATP-dependent RNA helicase SUPV3L1, mitochondrial isoform X2 [Erinaceus europaeus] diamond 375 74.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Erinaceidae Erinaceus Erinaceus europaeus
29201704 29201704 PRJNA807685_P_NODE_66089_length_152_cov_1.113043_g65016_i0 PRJNA807685 66089 152 1.113043 1.69182536 Tupaia chinensis 246437 Chordata Chordata 43.9 0.00425   NR XP_006168722.1 246437 g65016 i0 46.3 0.809210526315789 41 22 80.9 0 13 135 1362 1402 XP_006168722.1 zinc finger protein 142 [Tupaia chinensis] diamond 123 43.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Scandentia Tupaiidae Tupaia Tupaia chinensis
29620421 29620421 PRJNA807685_P_NODE_55630_length_164_cov_1.220472_g54557_i0 PRJNA807685 55630 164 1.220472 2.00157408 Chordata 7711 Chordata Chordata 57.4 8.63e-8   NR XP_055980128.1 62283 g54557 i0 70.6 45.4024390243902 34 10 62.2 0 163 62 710 743 XP_055980128.1 zinc finger protein 711 isoform X3 [Sorex fumeus] diamond 7446 57.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Eulipotyphla Soricidae Sorex Sorex fumeus
29833060 29833060 PRJNA807685_P_NODE_66971_length_151_cov_1.342105_g65898_i0 PRJNA807685 66971 151 1.342105 2.02657855 Vicugna pacos 30538 Chordata Chordata 58.2 1.78e-8   NR XP_031536305.1 30538 g65898 i0 87.9 0.655629139072848 33 4 65.6 0 101 3 42 74 XP_031536305.1 uncharacterized protein LOC116281797 [Vicugna pacos] diamond 99 58.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Camelidae Vicugna Vicugna pacos
30062919 30062919 PRJNA807685_P_NODE_57231_length_162_cov_1.208000_g56158_i0 PRJNA807685 57231 162 1.208 1.95696 root 1 Root_unresolved Root_unresolved 44.3 0.00354   NR XP_035677309.1 7739 g56158 i0 54.3 9.05555555555556 35 16 64.8 0 158 54 10 44 XP_035677309.1 death-associated protein kinase dapk-1-like [Branchiostoma floridae] diamond 1467 44.7 0.991051454138702 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma floridae
30117236 30117236 PRJNA807685_P_NODE_24932_length_267_cov_1.352174_g23859_i0 PRJNA807685 24932 267 1.352174 3.61030458 Lepidochelys kempii 8472 Chordata Chordata 49.3 2.08e-4   NR CAM4665324.1 8472 g23859 i0 33 2.53932584269663 88 56 96.6 2 265 8 175 261 CAM4665324.1 unnamed protein product [Lepidochelys kempii] diamond 678 49.3 1 Eukaryota Opisthokonta Metazoa Chordata   Testudines Cheloniidae Lepidochelys Lepidochelys kempii
30252803 30252803 PRJNA807685_P_NODE_37572_length_202_cov_1.121212_g36499_i0 PRJNA807685 37572 202 1.121212 2.26484824 Metazoa 33208 Chordata Chordata 97.8 8.94e-22   NR DBA23916.1 30357 g36499 i0 93.8 70.5594059405941 48 3 71.3 0 58 201 320 367 DBA23916.1 TPA: hypothetical protein GDO54_011629 [Pyxicephalus adspersus] diamond 14253 98.6 0.991886409736308 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pyxicephalidae Pyxicephalus Pyxicephalus adspersus
30717576 30717576 PRJNA807685_P_NODE_50894_length_171_cov_1.597015_g49821_i0 PRJNA807685 50894 171 1.597015 2.73089565 Branchiostoma belcheri 7741 Chordata Chordata 50.8 1.91e-5   NR KAI8496424.1 7741 g49821 i0 78.6 2.49122807017544 28 6 49.1 0 42 125 60 87 KAI8496424.1 Golgi reassembly-stacking protein 1 [Branchiostoma belcheri] diamond 426 50.8 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
31033951 31033951 PRJNA807685_P_NODE_42755_length_187_cov_2.313333_g41682_i0 PRJNA807685 42755 187 2.313333 4.32593271 Melospiza georgiana 44398 Chordata Chordata 42.4 0.00883   NR XP_057898553.1 44398 g41682 i0 44.4 0.72192513368984 45 23 72.2 1 51 185 71 113 XP_057898553.1 zinc finger protein 79-like [Melospiza georgiana] diamond 135 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Aves Passeriformes Passerellidae Melospiza Melospiza georgiana
31223036 31223036 PRJNA807685_P_NODE_53635_length_167_cov_1.153846_g52562_i0 PRJNA807685 53635 167 1.153846 1.92692282 Podarcis muralis 64176 Chordata Chordata 62 2.02e-9   NR XP_028607020.1 64176 g52562 i0 70.6 1.47305389221557 34 10 61.1 0 37 138 339 372 XP_028607020.1 prostatic acid phosphatase-like [Podarcis muralis] diamond 246 62 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Lacertidae Podarcis Podarcis muralis
31697679 31697679 PRJNA807685_P_NODE_59917_length_158_cov_2.355372_g58844_i0 PRJNA807685 59917 158 2.355372 3.72148776 Dendropsophus ebraccatus 150705 Chordata Chordata 72.8 2.95e-13   NR XP_069800966.1 150705 g58844 i0 55.8 3.9493670886076 52 23 98.7 0 2 157 635 686 XP_069800966.1 uncharacterized protein [Dendropsophus ebraccatus] diamond 624 72.8 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Hylidae Dendropsophus Dendropsophus ebraccatus
32149547 32149547 PRJNA807685_P_NODE_65298_length_152_cov_3.217391_g64225_i0 PRJNA807685 65298 152 3.217391 4.89043432 Metazoa 33208 Chordata Chordata 46.6 4.7e-4   NR XP_040273710.1 8384 g64225 i0 54.1 3.82894736842105 37 17 73 0 131 21 130 166 XP_040273710.1 unconventional myosin-If isoform X2 [Bufo bufo] diamond 582 46.6 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufo Bufo bufo
32457165 32457165 PRJNA807685_P_NODE_38079_length_200_cov_1.453988_g37006_i0 PRJNA807685 38079 200 1.453988 2.907976 Phallusia mammillata 59560 Chordata Chordata 44.3 0.00596   NR CAB3265654.1 59560 g37006 i0 38.3 0.705 47 29 70.5 0 182 42 142 188 CAB3265654.1 RING finger protein 32-like [Phallusia mammillata] diamond 141 44.3 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Ascidiidae Phallusia Phallusia mammillata
32466075 32466075 PRJNA807685_P_NODE_63079_length_155_cov_1.262712_g62006_i0 PRJNA807685 63079 155 1.262712 1.9572036 Metazoa 33208 Chordata Chordata 50.4 7.75e-6   NR KAF6506059.1 9407 g62006 i0 83.3 13.5290322580645 30 5 58.1 0 1 90 53 82 KAF6506059.1 hypothetical protein HJG63_007910 [Rousettus aegyptiacus] diamond 2097 50.8 0.992125984251969 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
32749718 32749718 PRJNA807685_P_NODE_43700_length_185_cov_1.783784_g42627_i0 PRJNA807685 43700 185 1.783784 3.3000004 Metazoa 33208 Chordata Chordata 45.4 0.00187   NR CAK8661276.1 30338 g42627 i0 57.1 5.85405405405405 35 15 56.8 0 180 76 27 61 CAK8661276.1 Zinc finger protein 300, partial [Bufotes viridis] diamond 1083 45.8 0.991266375545852 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufotes Bufotes viridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;