RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA807347" and tax_phylum = "Candidatus Muiribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Muiribacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA807347 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32583641 32583641 PRJNA807347_P_NODE_11319_length_255_cov_2.714286_g11216_i0 PRJNA807347 11319 255 2.714286 6.9214293 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 75.9 2.02e-15   NR MCK9476971.1 2053465 g11216 i0 70.5 0.517647058823529 44 13 51.8 0 133 2 2 45 MCK9476971.1 hypothetical protein [Candidatus Muiribacterium halophilum] diamond 132 75.9 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum
32835281 32835281 PRJNA807347_P_NODE_8700_length_282_cov_0.966507_g8597_i0 PRJNA807347 8700 282 0.966507 2.72554974 Candidatus Muiribacterium halophilum 2053465 Bacteria Bacteria 120 1.35e-29   NR MCK9476338.1 2053465 g8597 i0 65.1 1.75531914893617 83 29 88.3 0 281 33 248 330 MCK9476338.1 hypothetical protein [Candidatus Muiribacterium halophilum] diamond 495 120 1 Bacteria Bacteria candidate phyla   Candidatus Muiribacteriota Candidatus Muiribacteriia   Candidatus Muiribacteriaceae Candidatus Muiribacterium Candidatus Muiribacterium halophilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;