RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA807347" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA807347 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27022533 27022533 PRJNA807347_P_NODE_13362_length_249_cov_0.886364_g13259_i0 PRJNA807347 13362 249 0.886364 2.20704636 Erythrocytic necrosis virus 1543320 Viruses Viruses 166 3.45e-49   NR QCF47454.1 1543320 g13259 i0 97.6 0.987951807228916 82 2 98.8 0 248 3 161 242 QCF47454.1 hypothetical protein, partial [Erythrocytic necrosis virus] diamond 246 166 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
31349852 31349852 PRJNA807347_P_NODE_8216_length_287_cov_2.018692_g8113_i0 PRJNA807347 8216 287 2.018692 5.79364604 Ectromelia virus 12643 Viruses Viruses 194 5.06e-60   NR NP_671619.1 12643 g8113 i0 98.9 6.95121951219512 95 1 99.3 0 286 2 130 224 NP_671619.1 EVM101 [Ectromelia virus] diamond 1995 194 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus ectromelia
32235863 32235863 PRJNA807347_P_NODE_10658_length_261_cov_2.329787_g10555_i0 PRJNA807347 10658 261 2.329787 6.08074407 Monkeypox virus 10244 Viruses Viruses 174 1.82e-48   NR UWJ11783.1 10244 g10555 i0 100 37.4942528735632 86 0 98.9 0 2 259 181 266 UWJ11783.1 mRNA capping enzyme large subunit [Monkeypox virus] diamond 9786 174 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;