RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA807347" and tax_clade = "Luna-1 subcluster"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Luna-1 subcluster · 2 ✖

bioproject 1

  • PRJNA807347 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31444617 31444617 PRJNA807347_P_NODE_17116_length_242_cov_0.917160_g17013_i0 PRJNA807347 17116 242 0.91716 2.2195272 Aquiluna sp. 2053504 Bacteria Bacteria 114 7.9799999999999985e-28   NR HEY7854197.1 2053504 g17013 i0 77.5 2.71487603305785 71 16 88 0 25 237 1 71 HEY7854197.1 chorismate-binding protein [Aquiluna sp.] diamond 657 114 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna sp.
32267322 32267322 PRJNA807347_P_NODE_6058_length_333_cov_1.792308_g5955_i0 PRJNA807347 6058 333 1.792308 5.96838564 Aquiluna sp. 2053504 Bacteria Bacteria 126 3.77e-31   NR MDP5026008.1 2053504 g5955 i0 91.3 1.86486486486486 69 6 62.2 0 331 125 723 791 MDP5026008.1 pyruvate dehydrogenase (acetyl-transferring), homodimeric type [Aquiluna sp.] diamond 621 126 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Aquiluna Aquiluna sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;