RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

30 rows where analysis = "diamond", bioproject = "PRJNA807347" and tax_clade = "Discoba"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 30 ✖

bioproject 1

  • PRJNA807347 · 30 ✖

analysis 1

  • diamond · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2082074 2082074 PRJNA807347_P_NODE_6522_length_321_cov_1.258065_g6419_i0 PRJNA807347 6522 321 1.258065 4.03838865 Trypanosoma 5690 Euglenozoa other_Eukaryota 133 2e-35   NR ABS01292.1 38249 g6419 i0 64.5 4.4392523364486 93 33 86.9 0 41 319 5 97 ABS01292.1 similar to activated kinase C receptor [Trypanosoma carassii] diamond 1425 133 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma carassii
3774434 3774434 PRJNA807347_P_NODE_6623_length_318_cov_1.824490_g6520_i0 PRJNA807347 6623 318 1.82449 5.8018782 Kinetoplastea 5653 Euglenozoa other_Eukaryota 106 2.2300000000000003e-27   NR XP_009311485.1 71804 g6520 i0 66.3 1.77358490566038 92 28 85.8 2 24 296 8 97 XP_009311485.1 40S ribosomal protein S33 [Trypanosoma grayi] diamond 564 106 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
4634742 4634742 PRJNA807347_P_NODE_16964_length_242_cov_0.923077_g16861_i0 PRJNA807347 16964 242 0.923077 2.23384634 Bodo saltans 75058 Euglenozoa other_Eukaryota 114 1e-30   NR CUF90321.1 75058 g16861 i0 77.1 0.867768595041322 70 16 86.8 0 212 3 1 70 CUF90321.1 60S ribosomal protein L22, putative [Bodo saltans] diamond 210 114 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
5909702 5909702 PRJNA807347_P_NODE_4005_length_415_cov_0.871345_g3902_i0 PRJNA807347 4005 415 0.871345 3.61608175 Leishmania martiniquensis 1580590 Euglenozoa other_Eukaryota 161 2.84e-47   NR XP_067175518.1 1580590 g3902 i0 62.3 3.99036144578313 138 49 99.8 1 1 414 56 190 XP_067175518.1 hypothetical protein LSCM1_02560 [Leishmania martiniquensis] diamond 1656 161 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania martiniquensis
8459264 8459264 PRJNA807347_P_NODE_13387_length_249_cov_0.886364_g13284_i0 PRJNA807347 13387 249 0.886364 2.20704636 Bodo saltans 75058 Euglenozoa other_Eukaryota 135 7.559999999999998e-35   NR CUF84931.1 75058 g13284 i0 81.5 2.93975903614458 81 15 97.6 0 2 244 211 291 CUF84931.1 heat shock protein 60, mitochondrial chaperonin, putative [Bodo saltans] diamond 732 135 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
8459319 8459319 PRJNA807347_P_NODE_4607_length_385_cov_1.391026_g4504_i0 PRJNA807347 4607 385 1.391026 5.3554501 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 140 8.37e-39   NR KPI82408.1 5684 g4504 i0 61.4 5.93766233766234 127 48 99 1 381 1 67 192 KPI82408.1 putative 60S ribosomal protein L13 [Leptomonas seymouri] diamond 2286 141 0.99290780141844 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas seymouri
12285735 12285735 PRJNA807347_P_NODE_6230_length_328_cov_2.847059_g6127_i0 PRJNA807347 6230 328 2.847059 9.33835352 Trypanosoma 5690 Euglenozoa other_Eukaryota 172 3.79e-53   NR XP_029237437.1 5698 g6127 i0 75 4.9390243902439 108 27 98.8 0 3 326 12 119 XP_029237437.1 solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31 [Trypanosoma rangeli] diamond 1620 173 0.994219653179191 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
16108757 16108757 PRJNA807347_P_NODE_6033_length_334_cov_1.283525_g5930_i0 PRJNA807347 6033 334 1.283525 4.2869735 Kinetoplastea 5653 Euglenozoa other_Eukaryota 132 4.03e-37   NR RNC46273.1 5693 g5930 i0 70.9 2.2814371257485 86 25 77.2 0 313 56 39 124 RNC46273.1 40S ribosomal protein S27 [Trypanosoma cruzi] diamond 762 133 0.992481203007519 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
18657657 18657657 PRJNA807347_P_NODE_12815_length_250_cov_0.881356_g12712_i0 PRJNA807347 12815 250 0.881356 2.20339 Trypanosoma equiperdum 5694 Euglenozoa other_Eukaryota 89 1.94e-18   NR XP_067080338.1 5694 g12712 i0 47.6 2.016 84 42 98.4 1 250 5 61 144 XP_067080338.1 protein kinase C substrate protein, heavy chain, putative [Trypanosoma equiperdum] diamond 504 89 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma equiperdum
19932995 19932995 PRJNA807347_P_NODE_3636_length_437_cov_1.917582_g3533_i0 PRJNA807347 3636 437 1.917582 8.37983334 Trypanosoma 5690 Euglenozoa other_Eukaryota 114 1.9699999999999999e-28   NR XP_029224128.1 83891 g3533 i0 65.5 1.66132723112128 142 46 95.4 1 436 20 67 208 XP_029224128.1 large subunit ribosomal protein LP0 [Trypanosoma conorhini] diamond 726 114 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
21208596 21208596 PRJNA807347_P_NODE_17657_length_231_cov_2.183544_g17554_i0 PRJNA807347 17657 231 2.183544 5.04398664 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 91.3 1.13e-20   NR GET85682.1 5689 g17554 i0 62.5 2.49350649350649 64 24 83.1 0 230 39 150 213 GET85682.1 60S ribosomal protein L10, putative [Leishmania tarentolae] diamond 576 91.7 0.995637949836423 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania tarentolae
22483205 22483205 PRJNA807347_P_NODE_5938_length_337_cov_1.310606_g5835_i0 PRJNA807347 5938 337 1.310606 4.41674222 Kinetoplastea 5653 Euglenozoa other_Eukaryota 122 2.04e-33   NR XP_009313329.1 71804 g5835 i0 66 6.70326409495549 106 33 91.7 1 309 1 4 109 XP_009313329.1 60S ribosomal protein L35 [Trypanosoma grayi] diamond 2259 122 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
26769281 26769281 PRJNA807347_P_NODE_12781_length_250_cov_1.310734_g12678_i0 PRJNA807347 12781 250 1.310734 3.276835 Bodo saltans 75058 Euglenozoa other_Eukaryota 112 5.710000000000001e-29   NR CUG91411.1 75058 g12678 i0 69.5 0.984 82 25 98.4 0 248 3 60 141 CUG91411.1 ribosomal protein S7e, putative [Bodo saltans] diamond 246 112 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
27189359 27189359 PRJNA807347_P_NODE_13902_length_248_cov_0.891429_g13799_i0 PRJNA807347 13902 248 0.891429 2.21074392 Trypanosoma 5690 Euglenozoa other_Eukaryota 88.2 1.07e-19   NR RNC30299.1 5693 g13799 i0 64.4 1.42741935483871 59 21 71.4 0 70 246 58 116 RNC30299.1 flagellar radial spoke component, partial [Trypanosoma cruzi] diamond 354 88.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
28601743 28601743 PRJNA807347_P_NODE_13367_length_249_cov_0.886364_g13264_i0 PRJNA807347 13367 249 0.886364 2.20704636 Phytomonas sp. EM1 479712 Euglenozoa other_Eukaryota 59.3 4.72e-8   NR CCW62650.1 479712 g13264 i0 34.6 3.86746987951807 78 51 94 0 248 15 172 249 CCW62650.1 unnamed protein product [Phytomonas sp. EM1] diamond 963 59.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Phytomonas Phytomonas sp. EM1
29170116 29170116 PRJNA807347_P_NODE_12369_length_251_cov_0.876404_g12266_i0 PRJNA807347 12369 251 0.876404 2.19977404 Euglena gracilis 3039 Euglenozoa other_Eukaryota 83.2 2.11e-18   NR AGQ04198.1 3039 g12266 i0 57.4 3.65737051792829 61 26 72.9 0 251 69 56 116 AGQ04198.1 dynein light chain Tctex-type 1-like protein, partial [Euglena gracilis] diamond 918 83.2 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
29422354 29422354 PRJNA807347_P_NODE_17049_length_242_cov_0.917160_g16946_i0 PRJNA807347 17049 242 0.91716 2.2195272 Bodo saltans 75058 Euglenozoa other_Eukaryota 81.6 3.79e-16   NR CUF10887.1 75058 g16946 i0 51.3 0.966942148760331 78 38 96.7 0 240 7 194 271 CUF10887.1 WD40 repeat-containing protein, putative [Bodo saltans] diamond 234 81.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29517166 29517166 PRJNA807347_P_NODE_9910_length_269_cov_1.127551_g9807_i0 PRJNA807347 9910 269 1.127551 3.03311219 Phytomonas sp. EM1 479712 Euglenozoa other_Eukaryota 132 1.12e-37   NR CCW60375.1 479712 g9807 i0 77.3 0.981412639405205 88 20 98.1 0 1 264 34 121 CCW60375.1 unnamed protein product [Phytomonas sp. EM1] diamond 264 132 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Phytomonas Phytomonas sp. EM1
29833040 29833040 PRJNA807347_P_NODE_9751_length_270_cov_2.086294_g9648_i0 PRJNA807347 9751 270 2.086294 5.6329938 Strigomonas culicis 28005 Euglenozoa other_Eukaryota 115 1.85e-27   NR EPY19478.1 28005 g9648 i0 60.7 1.96666666666667 89 34 98.9 1 270 4 470 557 EPY19478.1 ATP-binding protein cassette, subfamily D (ALD), member 2 [Strigomonas culicis] diamond 531 115 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
30654360 30654360 PRJNA807347_P_NODE_12833_length_250_cov_0.881356_g12730_i0 PRJNA807347 12833 250 0.881356 2.20339 Phytomonas sp. Hart1 223615 Euglenozoa other_Eukaryota 62 7.63e-10   NR CCW67377.1 223615 g12730 i0 49.3 4.08 67 26 72 2 246 67 65 130 CCW67377.1 unnamed protein product [Phytomonas sp. Hart1] diamond 1020 62 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Phytomonas Phytomonas sp. Hart1
31002127 31002127 PRJNA807347_P_NODE_15654_length_244_cov_2.187135_g15551_i0 PRJNA807347 15654 244 2.187135 5.3366094 Bodo saltans 75058 Euglenozoa other_Eukaryota 141 3.2999999999999987e-41   NR CUG08503.1 75058 g15551 i0 82.7 0.995901639344262 81 14 99.6 0 1 243 34 114 CUG08503.1 60S ribosomal protein L32, putative [Bodo saltans] diamond 243 141 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
31539646 31539646 PRJNA807347_P_NODE_16056_length_244_cov_0.906433_g15953_i0 PRJNA807347 16056 244 0.906433 2.21169652 Bodo saltans 75058 Euglenozoa other_Eukaryota 75.1 1.51e-13   NR CUF41660.1 75058 g15953 i0 48.6 1.81967213114754 74 36 91 1 9 230 2363 2434 CUF41660.1 membrane-associated protein, putative [Bodo saltans] diamond 444 75.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
31832862 31832862 PRJNA807347_P_NODE_8597_length_283_cov_1.271429_g8494_i0 PRJNA807347 8597 283 1.271429 3.59814407 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 127 3.8999999999999994e-36   NR XP_003864254.1 5661 g8494 i0 75.9 8.30035335689046 87 21 92.2 0 263 3 1 87 XP_003864254.1 60S ribosomal protein L13a, putative, partial [Leishmania donovani] diamond 2349 127 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania donovani
31887363 31887363 PRJNA807347_P_NODE_10797_length_260_cov_1.657754_g10694_i0 PRJNA807347 10797 260 1.657754 4.3101604 Perkinsela sp. CCAP 156 1935466 Euglenozoa other_Eukaryota 88.6 1.07e-18   NR KNH05013.1 1314962 g10694 i0 56.2 4.25769230769231 73 32 84.2 0 221 3 6 78 KNH05013.1 60S acidic ribosomal subunit protein [Perkinsela sp. CCAP 1560/4] diamond 1107 88.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4
32054466 32054466 PRJNA807347_P_NODE_9178_length_276_cov_1.768473_g9075_i0 PRJNA807347 9178 276 1.768473 4.88098548 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 107 1.0400000000000002e-27   NR KAL0495505.1 5680 g9075 i0 70 6.21739130434783 80 23 85.9 1 268 32 47 126 KAL0495505.1 putative Ribosomal protein 50S-L15, 50S-L18e, 60S-L27A [Leishmania shawi] diamond 1716 108 0.990740740740741 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania shawi
32212821 32212821 PRJNA807347_P_NODE_9658_length_271_cov_1.939394_g9555_i0 PRJNA807347 9658 271 1.939394 5.25575774 Trypanosoma 5690 Euglenozoa other_Eukaryota 89 9.61e-19   NR RNC34229.1 5693 g9555 i0 69.9 4.98154981549815 73 22 80.8 0 2 220 244 316 RNC34229.1 putative 60S ribosomal protein L7a [Trypanosoma cruzi] diamond 1350 89 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
32425389 32425389 PRJNA807347_P_NODE_15359_length_245_cov_0.906977_g15256_i0 PRJNA807347 15359 245 0.906977 2.22209365 Bodo saltans 75058 Euglenozoa other_Eukaryota 66.6 1.3e-10   NR CUG91360.1 75058 g15256 i0 53.6 1.38367346938776 56 26 68.6 0 64 231 4 59 CUG91360.1 cysteine peptidase, putative [Bodo saltans] diamond 339 66.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32520538 32520538 PRJNA807347_P_NODE_16899_length_242_cov_0.923077_g16796_i0 PRJNA807347 16899 242 0.923077 2.23384634 Bodo saltans 75058 Euglenozoa other_Eukaryota 74.3 4.21e-15   NR CUG84616.1 75058 g16796 i0 47.1 0.867768595041322 70 37 86.8 0 30 239 17 86 CUG84616.1 ARP2/3 complex 16kDa subunit, putative [Bodo saltans] diamond 210 74.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32772259 32772259 PRJNA807347_P_NODE_11060_length_258_cov_1.167568_g10957_i0 PRJNA807347 11060 258 1.167568 3.01232544 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 129 4.63e-34   NR KAJ9467952.1 91374 g10957 i0 63.5 1.97674418604651 85 31 98.8 0 256 2 255 339 KAJ9467952.1 Crustacean calcium-binding protein 23 [Diplonema papillatum] diamond 510 129 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
32772261 32772261 PRJNA807347_P_NODE_12500_length_251_cov_0.870787_g12397_i0 PRJNA807347 12500 251 0.870787 2.18567537 Bodo saltans 75058 Euglenozoa other_Eukaryota 93.6 1.39e-21   NR CUG92810.1 75058 g12397 i0 63.8 0.824701195219124 69 25 82.5 0 249 43 27 95 CUG92810.1 40S ribosomal protein S21, putative [Bodo saltans] diamond 207 93.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;