RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA806354" and tax_phylum = "Streptophyta"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA806354 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27686352 27686352 PRJNA806354_P_NODE_43024_length_199_cov_10.531746_g42915_i0 PRJNA806354 43024 199 10.531746 20.95817454 Bauhinia variegata 167791 Plants Plants 40 0.0357   NR KAI4297952.1 167791 g42915 i0 55 0.603015075376884 40 18 60.3 0 52 171 9 48 KAI4297952.1 hypothetical protein L6164_037806 [Bauhinia variegata] diamond 120 40 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Bauhinia Bauhinia variegata
30821337 30821337 PRJNA806354_P_NODE_42954_length_206_cov_11.654135_g42845_i0 PRJNA806354 42954 206 11.654135 24.0075181 Fabaceae 3803 Plants Plants 45.4 4.31e-4   NR XLS74234.1 3818 g42845 i0 54.8 4.29611650485437 42 19 61.2 0 4 129 49 90 XLS74234.1 hypothetical protein HN51_031099, partial [Arachis hypogaea] diamond 885 45.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Arachis Arachis hypogaea

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;