RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA806354" and tax_phylum = "Candidatus Daviesiibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Daviesiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA806354 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31159611 31159611 PRJNA806354_P_NODE_38235_length_246_cov_0.890173_g38126_i0 PRJNA806354 38235 246 0.890173 2.18982558 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 117 1.58e-31   NR MBI4036342.1 2053542 g38126 i0 71.6 0.98780487804878 81 23 98.8 0 243 1 68 148 MBI4036342.1 RpiB/LacA/LacB family sugar-phosphate isomerase [Candidatus Daviesbacteria bacterium] diamond 243 117 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium
31697655 31697655 PRJNA806354_P_NODE_35957_length_250_cov_0.870056_g35848_i0 PRJNA806354 35957 250 0.870056 2.17514 Candidatus Daviesbacteria bacterium 2053542 Bacteria Bacteria 98.6 2.46e-24   NR MBI3103487.1 2053542 g35848 i0 69 1.704 71 22 85.2 0 215 3 33 103 MBI3103487.1 four helix bundle protein [Candidatus Daviesbacteria bacterium] diamond 426 98.6 1 Bacteria Bacteria candidate phyla   Candidatus Daviesiibacteriota         Candidatus Daviesbacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;