RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA806354" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA806354 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28736832 28736832 PRJNA806354_P_NODE_37727_length_247_cov_0.885057_g37618_i0 PRJNA806354 37727 247 0.885057 2.18609079 Lasiosphaeria 92901 Fungi Fungi 92.8 9.07e-20   NR KAK3358447.1 92902 g37618 i0 52.4 3.97165991902834 82 37 97.2 1 7 246 347 428 KAK3358447.1 quinon protein alcohol dehydrogenase-like superfamily [Lasiosphaeria ovina] diamond 981 93.2 0.995708154506438 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Lasiosphaeriaceae Lasiosphaeria Lasiosphaeria ovina
31602897 31602897 PRJNA806354_P_NODE_33116_length_258_cov_2.378378_g33007_i0 PRJNA806354 33116 258 2.378378 6.13621524 Pleurostoma richardsiae 41990 Fungi Fungi 75.5 1.18e-13   NR KAJ9156173.1 41990 g33007 i0 49.4 0.988372093023256 85 42 98.8 1 1 255 257 340 KAJ9156173.1 GPI-anchored cell wall organization protein ecm33 [Pleurostoma richardsiae] diamond 255 75.5 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Calosphaeriales Pleurostomataceae Pleurostoma Pleurostoma richardsiae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;