contig_metadata
54 rows where analysis = "diamond", bioproject = "PRJNA804229" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13558065 | 13558065 | PRJNA804229_S_NODE_54671_length_271_cov_3.061404_g53713_i0 | PRJNA804229 | 54671 | 271 | 3.061404 | 8.29640484 | Pseudomonas sp. S3E12 | 1873126 | Bacteria | Bacteria | 174 | 1.03e-51 | NR | WP_083236498.1 | 1873126 | g53713 | i0 | 91.1 | 0.996309963099631 | 90 | 8 | 99.6 | 0 | 271 | 2 | 21 | 110 | WP_083236498.1 toll/interleukin-1 receptor domain-containing protein [Pseudomonas sp. S3E12] | diamond | 270 | 174 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. S3E12 | ||
| 16107480 | 16107480 | PRJNA804229_S_NODE_74213_length_236_cov_1.492228_g73255_i0 | PRJNA804229 | 74213 | 236 | 1.492228 | 3.52165808 | Methylobacterium sp. J- | 409 | Bacteria | Bacteria | 160 | 5.91e-45 | NR | WP_244028216.1 | 2836666 | g73255 | i0 | 98.7 | 0.991525423728814 | 78 | 1 | 99.2 | 0 | 234 | 1 | 388 | 465 | WP_244028216.1 type VI secretion system-associated FHA domain protein TagH [Methylobacterium sp. J-090] | diamond | 234 | 160 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium sp. J-090 | ||
| 22480860 | 22480860 | PRJNA804229_S_NODE_32758_length_335_cov_1.602740_g31800_i0 | PRJNA804229 | 32758 | 335 | 1.60274 | 5.369179 | Marinobacter bryozoorum | 256324 | Bacteria | Bacteria | 86.7 | 3.35e-17 | NR | WP_248236549.1 | 256324 | g31800 | i0 | 64.3 | 0.626865671641791 | 70 | 20 | 62.7 | 2 | 330 | 121 | 368 | 432 | WP_248236549.1 hypothetical protein [Marinobacter bryozoorum] | diamond | 210 | 86.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Marinobacteraceae | Marinobacter | Marinobacter bryozoorum | ||
| 22899591 | 22899591 | PRJNA804229_S_NODE_158698_length_162_cov_1.210084_g157740_i0 | PRJNA804229 | 158698 | 162 | 1.210084 | 1.96033608 | Pseudoduganella sp. UC29_1 | 1880898 | Bacteria | Bacteria | 96.7 | 1.2099999999999999e-24 | NR | WP_395403760.1 | 3374553 | g157740 | i0 | 90.6 | 2.94444444444444 | 53 | 5 | 98.1 | 0 | 161 | 3 | 32 | 84 | WP_395403760.1 acyl carrier protein [Pseudoduganella sp. UC29_106] | diamond | 477 | 96.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Pseudoduganella | Pseudoduganella sp. UC29_106 | ||
| 26673977 | 26673977 | PRJNA804229_S_NODE_166361_length_158_cov_1.252174_g165403_i0 | PRJNA804229 | 166361 | 158 | 1.252174 | 1.97843492 | Pseudomonas sp. WN | 306 | Bacteria | Bacteria | 103 | 3.15e-24 | NR | PAU88394.1 | 2032629 | g165403 | i0 | 98 | 0.930379746835443 | 49 | 1 | 93 | 0 | 157 | 11 | 605 | 653 | PAU88394.1 TonB-dependent receptor [Pseudomonas sp. WN033] | diamond | 147 | 103 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. WN033 | ||
| 26705714 | 26705714 | PRJNA804229_S_NODE_37761_length_317_cov_2.058394_g36803_i0 | PRJNA804229 | 37761 | 317 | 2.058394 | 6.52510898 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 163 | 5.05e-45 | NR | WP_150601539.1 | 294 | g36803 | i0 | 88.4 | 2.43217665615142 | 86 | 10 | 81.4 | 0 | 299 | 42 | 200 | 285 | WP_150601539.1 E2/UBC family protein [Pseudomonas fluorescens] | diamond | 771 | 163 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 26936407 | 26936407 | PRJNA804229_S_NODE_146922_length_168_cov_1.920000_g145964_i0 | PRJNA804229 | 146922 | 168 | 1.92 | 3.2256 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 40 | 0.0324 | NR | WP_330534679.1 | 287 | g145964 | i0 | 100 | 1.03571428571429 | 16 | 0 | 28.6 | 0 | 48 | 1 | 40 | 55 | WP_330534679.1 hypothetical protein, partial [Pseudomonas aeruginosa] | diamond | 174 | 40.4 | 0.99009900990099 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 26959047 | 26959047 | PRJNA804229_S_NODE_112802_length_192_cov_1.369128_g111844_i0 | PRJNA804229 | 112802 | 192 | 1.369128 | 2.62872576 | Pseudomonas aeruginosa | 287 | Bacteria | Bacteria | 107 | 4.77e-28 | NR | WP_367005107.1 | 287 | g111844 | i0 | 85 | 1.875 | 60 | 9 | 93.8 | 0 | 183 | 4 | 53 | 112 | WP_367005107.1 hypothetical protein, partial [Pseudomonas aeruginosa] | diamond | 360 | 108 | 0.990740740740741 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 27125839 | 27125839 | PRJNA804229_S_NODE_159202_length_161_cov_2.940678_g158244_i0 | PRJNA804229 | 159202 | 161 | 2.940678 | 4.73449158 | root | 1 | Root_unresolved | Root_unresolved | 51.2 | 6.69e-7 | NR | WP_323630591.1 | 562 | g158244 | i0 | 50 | 3.46583850931677 | 48 | 23 | 87.6 | 1 | 17 | 157 | 11 | 58 | WP_323630591.1 hypothetical protein, partial [Escherichia coli] | diamond | 558 | 51.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 27157522 | 27157522 | PRJNA804229_S_NODE_190082_length_150_cov_0.897196_g189124_i0 | PRJNA804229 | 190082 | 150 | 0.897196 | 1.345794 | root | 1 | Root_unresolved | Root_unresolved | 43.1 | 0.00178 | NR | WP_220492997.1 | 573 | g189124 | i0 | 66.7 | 0.96 | 24 | 8 | 48 | 0 | 125 | 54 | 39 | 62 | WP_220492997.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 144 | 43.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 27180343 | 27180343 | PRJNA804229_S_NODE_140942_length_172_cov_1.116279_g139984_i0 | PRJNA804229 | 140942 | 172 | 1.116279 | 1.91999988 | Sphingomonas sp. J344 | 2898434 | Bacteria | Bacteria | 42 | 0.0268 | NR | WP_257845420.1 | 2898434 | g139984 | i0 | 42.9 | 0.854651162790698 | 49 | 27 | 83.7 | 1 | 160 | 17 | 130 | 178 | WP_257845420.1 thiamine-phosphate kinase [Sphingomonas sp. J344] | diamond | 147 | 42 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. J344 | ||
| 27370559 | 27370559 | PRJNA804229_S_NODE_173923_length_154_cov_1.729730_g172965_i0 | PRJNA804229 | 173923 | 154 | 1.72973 | 2.6637842 | Acinetobacter sp. ANC 5 | 472 | Bacteria | Bacteria | 92.4 | 1.58e-20 | NR | WP_086177603.1 | 1977877 | g172965 | i0 | 86 | 3.8961038961039 | 50 | 7 | 97.4 | 0 | 152 | 3 | 276 | 325 | WP_086177603.1 DNA cytosine methyltransferase [Acinetobacter sp. ANC 5054] | diamond | 600 | 92.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter sp. ANC 5054 | ||
| 27465127 | 27465127 | PRJNA804229_S_NODE_175623_length_153_cov_2.181818_g174665_i0 | PRJNA804229 | 175623 | 153 | 2.181818 | 3.33818154 | Candidatus Competibacteraceae bacterium | 2053538 | Bacteria | Bacteria | 41.2 | 0.0208 | NR | HRF45239.1 | 2053538 | g174665 | i0 | 60 | 0.588235294117647 | 30 | 12 | 58.8 | 0 | 99 | 10 | 99 | 128 | HRF45239.1 ATP-binding protein [Candidatus Competibacteraceae bacterium] | diamond | 90 | 41.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Candidatus Competibacteraceae | Candidatus Competibacteraceae bacterium | ||||
| 27695145 | 27695145 | PRJNA804229_S_NODE_104404_length_199_cov_2.153846_g103446_i0 | PRJNA804229 | 104404 | 199 | 2.153846 | 4.28615354 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 126 | 1.1999999999999999e-32 | NR | WP_172515402.1 | 135619 | g103446 | i0 | 89.4 | 1.98994974874372 | 66 | 7 | 99.5 | 0 | 1 | 198 | 35 | 100 | WP_172515402.1 MULTISPECIES: hypothetical protein [Oceanospirillales] | diamond | 396 | 127 | 0.992125984251969 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | |||||
| 27875340 | 27875340 | PRJNA804229_S_NODE_84785_length_221_cov_1.617978_g83827_i0 | PRJNA804229 | 84785 | 221 | 1.617978 | 3.57573138 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 50.1 | 3.89e-6 | NR | WP_322869326.1 | 573 | g83827 | i0 | 82.8 | 0.393665158371041 | 29 | 4 | 39.4 | 1 | 221 | 135 | 3 | 30 | WP_322869326.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 87 | 50.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 27938683 | 27938683 | PRJNA804229_S_NODE_184325_length_151_cov_1.333333_g183367_i0 | PRJNA804229 | 184325 | 151 | 1.333333 | 2.01333283 | Salmonella enterica | 28901 | Bacteria | Bacteria | 48.5 | 8.44e-6 | NR | MEQ1463787.1 | 28901 | g183367 | i0 | 73.3 | 1.82781456953642 | 30 | 8 | 59.6 | 0 | 97 | 8 | 21 | 50 | MEQ1463787.1 hypothetical protein [Salmonella enterica] | diamond | 276 | 48.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 28190959 | 28190959 | PRJNA804229_S_NODE_165906_length_158_cov_1.469565_g164948_i0 | PRJNA804229 | 165906 | 158 | 1.469565 | 2.3219127 | Pseudomonas jilinensis | 2078689 | Bacteria | Bacteria | 115 | 3.77e-29 | NR | WP_119701871.1 | 2078689 | g164948 | i0 | 100 | 0.987341772151899 | 52 | 0 | 98.7 | 0 | 157 | 2 | 72 | 123 | WP_119701871.1 glycosyltransferase [Pseudomonas jilinensis] | diamond | 156 | 115 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas jilinensis | ||
| 28254251 | 28254251 | PRJNA804229_S_NODE_169786_length_156_cov_1.699115_g168828_i0 | PRJNA804229 | 169786 | 156 | 1.699115 | 2.6506194 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 38.5 | 0.0424 | NR | MBB1208523.1 | 573 | g168828 | i0 | 63 | 0.519230769230769 | 27 | 10 | 51.9 | 0 | 156 | 76 | 13 | 39 | MBB1208523.1 DUF1725 domain-containing protein [Klebsiella pneumoniae] | diamond | 81 | 38.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 28475377 | 28475377 | PRJNA804229_S_NODE_36026_length_323_cov_1.217857_g35068_i0 | PRJNA804229 | 36026 | 323 | 1.217857 | 3.93367811 | Pseudomonas aeruginosa | 287 | Bacteria | Bacteria | 65.1 | 2.08e-11 | NR | WP_366983724.1 | 287 | g35068 | i0 | 85.3 | 0.315789473684211 | 34 | 5 | 31.6 | 0 | 96 | 197 | 38 | 71 | WP_366983724.1 hypothetical protein, partial [Pseudomonas aeruginosa] | diamond | 102 | 65.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 28475378 | 28475378 | PRJNA804229_S_NODE_65766_length_250_cov_0.927536_g64808_i0 | PRJNA804229 | 65766 | 250 | 0.927536 | 2.31884 | gamma proteobacterium HIMB55 | 745014 | Bacteria | Bacteria | 59.3 | 2.49e-8 | NR | EHQ57317.1 | 745014 | g64808 | i0 | 40.5 | 2.712 | 79 | 44 | 93.6 | 2 | 236 | 3 | 112 | 188 | EHQ57317.1 thymidylate kinase [gamma proteobacterium HIMB55] | diamond | 678 | 59.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Cellvibrionales | Halieaceae | gamma proteobacterium HIMB55 | |||
| 29021307 | 29021307 | PRJNA804229_S_NODE_168028_length_157_cov_1.289474_g167070_i0 | PRJNA804229 | 168028 | 157 | 1.289474 | 2.02447418 | Pseudomonas | 286 | Bacteria | Bacteria | 112 | 4.05e-28 | NR | WP_122300037.1 | 317 | g167070 | i0 | 100 | 1.98726114649682 | 52 | 0 | 99.4 | 0 | 1 | 156 | 298 | 349 | WP_122300037.1 hypothetical protein [Pseudomonas syringae] | diamond | 312 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae | ||
| 29264500 | 29264500 | PRJNA804229_S_NODE_115289_length_190_cov_1.306122_g114331_i0 | PRJNA804229 | 115289 | 190 | 1.306122 | 2.4816318 | Moritella marina | 90736 | Bacteria | Bacteria | 56.2 | 2.04e-8 | NR | WP_039794008.1 | 90736 | g114331 | i0 | 51.9 | 0.852631578947368 | 54 | 26 | 85.3 | 0 | 5 | 166 | 37 | 90 | WP_039794008.1 hypothetical protein, partial [Moritella marina] | diamond | 162 | 56.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Moritellaceae | Moritella | Moritella marina | ||
| 29264501 | 29264501 | PRJNA804229_S_NODE_145589_length_169_cov_1.523810_g144631_i0 | PRJNA804229 | 145589 | 169 | 1.52381 | 2.5752389 | Escherichia coli | 562 | Bacteria | Bacteria | 43.9 | 8.9e-4 | NR | WP_214018861.1 | 562 | g144631 | i0 | 64.5 | 0.550295857988166 | 31 | 11 | 55 | 0 | 3 | 95 | 49 | 79 | WP_214018861.1 hypothetical protein, partial [Escherichia coli] | diamond | 93 | 43.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 29327746 | 29327746 | PRJNA804229_S_NODE_118429_length_187_cov_2.333333_g117471_i0 | PRJNA804229 | 118429 | 187 | 2.333333 | 4.36333271 | Pseudomonas sp. WN | 306 | Bacteria | Bacteria | 125 | 3.49e-33 | NR | PAU85950.1 | 2032629 | g117471 | i0 | 93.4 | 0.978609625668449 | 61 | 4 | 97.9 | 0 | 3 | 185 | 97 | 157 | PAU85950.1 hypothetical protein CK507_17505 [Pseudomonas sp. WN033] | diamond | 183 | 125 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. WN033 | ||
| 29327748 | 29327748 | PRJNA804229_S_NODE_154509_length_164_cov_1.429752_g153551_i0 | PRJNA804229 | 154509 | 164 | 1.429752 | 2.34479328 | Pseudomonas sp. 2995-1 | 1712679 | Bacteria | Bacteria | 104 | 5.18e-25 | NR | PIB50738.1 | 1712679 | g153551 | i0 | 100 | 1.97560975609756 | 54 | 0 | 98.8 | 0 | 1 | 162 | 271 | 324 | PIB50738.1 hypothetical protein AOA61_26910 [Pseudomonas sp. 2995-1] | diamond | 324 | 104 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. 2995-1 | ||
| 29359501 | 29359501 | PRJNA804229_S_NODE_183689_length_151_cov_2.101852_g182731_i0 | PRJNA804229 | 183689 | 151 | 2.101852 | 3.17379652 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 84.3 | 8.85e-19 | NR | VVN72305.1 | 294 | g182731 | i0 | 74 | 0.993377483443709 | 50 | 13 | 99.3 | 0 | 1 | 150 | 93 | 142 | VVN72305.1 hypothetical protein PS718_00496 [Pseudomonas fluorescens] | diamond | 150 | 84.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 29643240 | 29643240 | PRJNA804229_S_NODE_111710_length_193_cov_1.280000_g110752_i0 | PRJNA804229 | 111710 | 193 | 1.28 | 2.4704 | unclassified Rhizobium | 2613769 | Bacteria | Bacteria | 92.4 | 1.2800000000000001e-22 | NR | WP_052227837.1 | 2613769 | g110752 | i0 | 100 | 0.746113989637306 | 48 | 0 | 74.6 | 0 | 1 | 144 | 49 | 96 | WP_052227837.1 MULTISPECIES: 30S ribosomal protein S21 [unclassified Rhizobium] | diamond | 144 | 92.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | |||
| 29706301 | 29706301 | PRJNA804229_S_NODE_31810_length_338_cov_10.054237_g30852_i0 | PRJNA804229 | 31810 | 338 | 10.054237 | 33.98332106 | Shigella sonnei | 624 | Bacteria | Bacteria | 85.5 | 3.06e-19 | NR | WP_353763804.1 | 624 | g30852 | i0 | 95.6 | 0.399408284023669 | 45 | 2 | 39.9 | 0 | 151 | 285 | 38 | 82 | WP_353763804.1 hypothetical protein, partial [Shigella sonnei] | diamond | 135 | 85.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Shigella | Shigella sonnei | ||
| 29896305 | 29896305 | PRJNA804229_S_NODE_67971_length_246_cov_1.418719_g67013_i0 | PRJNA804229 | 67971 | 246 | 1.418719 | 3.49004874 | Anaplasma phagocytophilum | 948 | Bacteria | Bacteria | 43.1 | 0.00623 | NR | SBO14924.1 | 948 | g67013 | i0 | 66.7 | 0.365853658536585 | 30 | 10 | 36.6 | 0 | 244 | 155 | 62 | 91 | SBO14924.1 Surface antigen [Anaplasma phagocytophilum] | diamond | 90 | 43.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Anaplasmataceae | Anaplasma | Anaplasma phagocytophilum | ||
| 29959351 | 29959351 | PRJNA804229_S_NODE_83451_length_223_cov_1.161111_g82493_i0 | PRJNA804229 | 83451 | 223 | 1.161111 | 2.58927753 | Rhizobium rhizogenes | 359 | Bacteria | Bacteria | 70.5 | 8.92e-14 | NR | NTJ66568.1 | 359 | g82493 | i0 | 97.3 | 0.497757847533632 | 37 | 1 | 49.8 | 0 | 1 | 111 | 56 | 92 | NTJ66568.1 hypothetical protein [Rhizobium rhizogenes] | diamond | 111 | 70.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Rhizobiaceae | Rhizobium | Rhizobium rhizogenes | ||
| 30157593 | 30157593 | PRJNA804229_S_NODE_97472_length_206_cov_1.656442_g96514_i0 | PRJNA804229 | 97472 | 206 | 1.656442 | 3.41227052 | Pseudomonas | 286 | Bacteria | Bacteria | 128 | 1.45e-32 | NR | WP_087092899.1 | 286 | g96514 | i0 | 100 | 1.98058252427184 | 68 | 0 | 99 | 0 | 205 | 2 | 396 | 463 | WP_087092899.1 MULTISPECIES: NB-ARC domain-containing protein [Pseudomonas] | diamond | 408 | 128 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | |||
| 30211959 | 30211959 | PRJNA804229_S_NODE_84852_length_221_cov_1.466292_g83894_i0 | PRJNA804229 | 84852 | 221 | 1.466292 | 3.24050532 | Burkholderiaceae bacterium | 2030806 | Bacteria | Bacteria | 45.1 | 0.00434 | NR | HEU5297290.1 | 2030806 | g83894 | i0 | 33.8 | 1.04524886877828 | 77 | 45 | 99.1 | 2 | 3 | 221 | 646 | 720 | HEU5297290.1 DUF2339 domain-containing protein [Burkholderiaceae bacterium] | diamond | 231 | 45.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Burkholderiaceae bacterium | |||
| 30275600 | 30275600 | PRJNA804229_S_NODE_173132_length_155_cov_0.955357_g172174_i0 | PRJNA804229 | 173132 | 155 | 0.955357 | 1.48080335 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 42.7 | 0.0108 | NR | MEM1077551.1 | 1977087 | g172174 | i0 | 47.7 | 0.851612903225806 | 44 | 21 | 85.2 | 1 | 5 | 136 | 176 | 217 | MEM1077551.1 adenosylcobinamide-GDP ribazoletransferase [Pseudomonadota bacterium] | diamond | 132 | 42.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 30275601 | 30275601 | PRJNA804229_S_NODE_57692_length_265_cov_2.144144_g56734_i0 | PRJNA804229 | 57692 | 265 | 2.144144 | 5.6819816 | Pseudomonas pergaminensis | 2853159 | Bacteria | Bacteria | 148 | 1.2399999999999997e-42 | NR | WP_368944951.1 | 2853159 | g56734 | i0 | 84.1 | 2.98867924528302 | 88 | 14 | 99.6 | 0 | 2 | 265 | 65 | 152 | WP_368944951.1 hypothetical protein [Pseudomonas pergaminensis] | diamond | 792 | 148 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas pergaminensis | ||
| 30402163 | 30402163 | PRJNA804229_S_NODE_183593_length_151_cov_2.222222_g182635_i0 | PRJNA804229 | 183593 | 151 | 2.222222 | 3.35555522 | Pseudomonas jilinensis | 2078689 | Bacteria | Bacteria | 101 | 1.09e-24 | NR | WP_119700698.1 | 2078689 | g182635 | i0 | 95.9 | 0.973509933774834 | 49 | 2 | 97.4 | 0 | 3 | 149 | 59 | 107 | WP_119700698.1 DUF3883 domain-containing protein [Pseudomonas jilinensis] | diamond | 147 | 101 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas jilinensis | ||
| 30505431 | 30505431 | PRJNA804229_S_NODE_69573_length_243_cov_2.220000_g68615_i0 | PRJNA804229 | 69573 | 243 | 2.22 | 5.3946 | Bacteria | 2 | Bacteria | Bacteria | 117 | 3.56e-30 | NR | WP_281785581.1 | 252130 | g68615 | i0 | 100 | 1.4320987654321 | 58 | 0 | 71.6 | 0 | 2 | 175 | 234 | 291 | WP_281785581.1 IS982 family transposase [Uruburuella suis] | diamond | 348 | 117 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Neisseriaceae | Uruburuella | Uruburuella suis | ||
| 30591219 | 30591219 | PRJNA804229_S_NODE_115413_length_190_cov_1.210884_g114455_i0 | PRJNA804229 | 115413 | 190 | 1.210884 | 2.3006796 | Pseudomonas sp. N3-W | 2975049 | Bacteria | Bacteria | 62 | 2.63e-9 | NR | WP_259502846.1 | 2975049 | g114455 | i0 | 93.8 | 1.01052631578947 | 32 | 2 | 50.5 | 0 | 188 | 93 | 323 | 354 | WP_259502846.1 tyrosine-type recombinase/integrase [Pseudomonas sp. N3-W] | diamond | 192 | 62 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. N3-W | ||
| 30685929 | 30685929 | PRJNA804229_S_NODE_110593_length_194_cov_1.178808_g109635_i0 | PRJNA804229 | 110593 | 194 | 1.178808 | 2.28688752 | Pseudomonas sp. E6 | 306 | Bacteria | Bacteria | 135 | 1.6e-37 | NR | WP_177029293.1 | 2738820 | g109635 | i0 | 98.4 | 0.989690721649485 | 64 | 1 | 99 | 0 | 194 | 3 | 14 | 77 | WP_177029293.1 hypothetical protein [Pseudomonas sp. E6002] | diamond | 192 | 135 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. E6002 | ||
| 30947902 | 30947902 | PRJNA804229_S_NODE_93854_length_210_cov_1.437126_g92896_i0 | PRJNA804229 | 93854 | 210 | 1.437126 | 3.0179646 | Shewanella | 22 | Bacteria | Bacteria | 52 | 1.29e-5 | NR | WP_012143141.1 | 271097 | g92896 | i0 | 64.1 | 1.11428571428571 | 39 | 14 | 55.7 | 0 | 118 | 2 | 2 | 40 | WP_012143141.1 anaerobic ribonucleoside-triphosphate reductase [Shewanella sediminis] | diamond | 234 | 52.4 | 0.99236641221374 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Shewanellaceae | Shewanella | Shewanella sediminis | ||
| 31033937 | 31033937 | PRJNA804229_S_NODE_123195_length_184_cov_1.021277_g122237_i0 | PRJNA804229 | 123195 | 184 | 1.021277 | 1.87914968 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 50.8 | 2.49e-6 | NR | WP_182612708.1 | 573 | g122237 | i0 | 56.8 | 2.13586956521739 | 44 | 14 | 63.6 | 1 | 120 | 4 | 29 | 72 | WP_182612708.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 393 | 50.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 31033939 | 31033939 | PRJNA804229_S_NODE_52635_length_276_cov_1.879828_g51677_i0 | PRJNA804229 | 52635 | 276 | 1.879828 | 5.18832528 | Pseudomonas sp. Ag1 | 1197727 | Bacteria | Bacteria | 73.2 | 6.91e-14 | NR | WP_157222822.1 | 1197727 | g51677 | i0 | 100 | 0.434782608695652 | 40 | 0 | 43.5 | 0 | 155 | 274 | 1 | 40 | WP_157222822.1 hypothetical protein [Pseudomonas sp. Ag1] | diamond | 120 | 73.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. Ag1 | ||
| 31286307 | 31286307 | PRJNA804229_S_NODE_100815_length_203_cov_0.900000_g99857_i0 | PRJNA804229 | 100815 | 203 | 0.9 | 1.827 | Methylophaga sp. | 2024840 | Bacteria | Bacteria | 64.7 | 2.99e-10 | NR | NOQ93067.1 | 2024840 | g99857 | i0 | 52.6 | 3.33990147783251 | 57 | 27 | 84.2 | 0 | 202 | 32 | 252 | 308 | NOQ93067.1 type I-F CRISPR-associated endonuclease Cas1 [Methylophaga sp.] | diamond | 678 | 64.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Thiotrichales | Piscirickettsiaceae | Methylophaga | Methylophaga sp. | ||
| 31381505 | 31381505 | PRJNA804229_S_NODE_106876_length_197_cov_1.558442_g105918_i0 | PRJNA804229 | 106876 | 197 | 1.558442 | 3.07013074 | Litchfieldella rifensis | 762643 | Bacteria | Bacteria | 65.9 | 2.28e-11 | NR | WP_386772309.1 | 762643 | g105918 | i0 | 46.2 | 1.97969543147208 | 65 | 34 | 97.5 | 1 | 2 | 193 | 27 | 91 | WP_386772309.1 L,D-transpeptidase family protein [Litchfieldella rifensis] | diamond | 390 | 65.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Halomonadaceae | Litchfieldella | Litchfieldella rifensis | ||
| 31413009 | 31413009 | PRJNA804229_S_NODE_158636_length_162_cov_1.210084_g157678_i0 | PRJNA804229 | 158636 | 162 | 1.210084 | 1.96033608 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 46.2 | 5.44e-4 | NR | WP_220492974.1 | 573 | g157678 | i0 | 67.7 | 1.7037037037037 | 31 | 10 | 57.4 | 0 | 70 | 162 | 17 | 47 | WP_220492974.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 276 | 46.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 31571321 | 31571321 | PRJNA804229_S_NODE_123316_length_184_cov_1.021277_g122358_i0 | PRJNA804229 | 123316 | 184 | 1.021277 | 1.87914968 | Pseudomonas aeruginosa | 287 | Bacteria | Bacteria | 71.2 | 1.23e-14 | NR | WP_366964873.1 | 287 | g122358 | i0 | 64.8 | 0.880434782608696 | 54 | 19 | 88 | 0 | 179 | 18 | 9 | 62 | WP_366964873.1 reverse transcriptase domain-containing protein, partial [Pseudomonas aeruginosa] | diamond | 162 | 71.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 31571323 | 31571323 | PRJNA804229_S_NODE_141116_length_172_cov_1.116279_g140158_i0 | PRJNA804229 | 141116 | 172 | 1.116279 | 1.91999988 | Aggregatibacter | 416916 | Bacteria | Bacteria | 58.9 | 2.44e-9 | NR | WP_109078941.1 | 416916 | g140158 | i0 | 53.6 | 2.8953488372093 | 56 | 24 | 97.7 | 1 | 3 | 170 | 1 | 54 | WP_109078941.1 MULTISPECIES: Gp49 family protein [Aggregatibacter] | diamond | 498 | 58.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Aggregatibacter | |||
| 31571325 | 31571325 | PRJNA804229_S_NODE_93876_length_210_cov_1.437126_g92918_i0 | PRJNA804229 | 93876 | 210 | 1.437126 | 3.0179646 | Escherichia coli | 562 | Bacteria | Bacteria | 43.9 | 0.00398 | NR | WP_329821276.1 | 562 | g92918 | i0 | 59 | 0.557142857142857 | 39 | 12 | 50 | 1 | 169 | 65 | 46 | 84 | WP_329821276.1 hypothetical protein, partial [Escherichia coli] | diamond | 117 | 43.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32235855 | 32235855 | PRJNA804229_S_NODE_107918_length_196_cov_1.568627_g106960_i0 | PRJNA804229 | 107918 | 196 | 1.568627 | 3.07450892 | Escherichia coli | 562 | Bacteria | Bacteria | 55.8 | 1.95e-8 | NR | WP_235640640.1 | 562 | g106960 | i0 | 86.7 | 0.459183673469388 | 30 | 4 | 45.9 | 0 | 68 | 157 | 4 | 33 | WP_235640640.1 hypothetical protein, partial [Escherichia coli] | diamond | 90 | 55.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 32235857 | 32235857 | PRJNA804229_S_NODE_186758_length_151_cov_0.888889_g185800_i0 | PRJNA804229 | 186758 | 151 | 0.888889 | 1.34222239 | Comamonas suwonensis | 2606214 | Bacteria | Bacteria | 42.4 | 0.0141 | NR | WP_169106332.1 | 2606214 | g185800 | i0 | 66.7 | 1.05298013245033 | 27 | 8 | 51.7 | 1 | 59 | 136 | 65 | 91 | WP_169106332.1 phosphatase PAP2 family protein [Comamonas suwonensis] | diamond | 159 | 42.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Comamonas | Comamonas suwonensis | ||
| 32529365 | 32529365 | PRJNA804229_S_NODE_152339_length_165_cov_1.573770_g151381_i0 | PRJNA804229 | 152339 | 165 | 1.57377 | 2.5967205 | root | 1 | Root_unresolved | Root_unresolved | 63.2 | 2.61e-11 | NR | WP_410954844.1 | 287 | g151381 | i0 | 55.6 | 5.67272727272727 | 54 | 23 | 98.2 | 1 | 1 | 162 | 35 | 87 | WP_410954844.1 hypothetical protein, partial [Pseudomonas aeruginosa] | diamond | 936 | 63.5 | 0.995275590551181 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 32552175 | 32552175 | PRJNA804229_S_NODE_135059_length_176_cov_0.917293_g134101_i0 | PRJNA804229 | 135059 | 176 | 0.917293 | 1.61443568 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 44.3 | 5.83e-4 | NR | WP_416493070.1 | 573 | g134101 | i0 | 62.9 | 0.596590909090909 | 35 | 13 | 59.7 | 0 | 19 | 123 | 38 | 72 | WP_416493070.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 105 | 44.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 32614974 | 32614974 | PRJNA804229_S_NODE_158380_length_162_cov_1.210084_g157422_i0 | PRJNA804229 | 158380 | 162 | 1.210084 | 1.96033608 | Salmonella enterica | 28901 | Bacteria | Bacteria | 47 | 5.16e-5 | NR | WP_348968400.1 | 28901 | g157422 | i0 | 57.1 | 0.777777777777778 | 42 | 16 | 74.1 | 1 | 6 | 125 | 5 | 46 | WP_348968400.1 hypothetical protein, partial [Salmonella enterica] | diamond | 126 | 47 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 32803773 | 32803773 | PRJNA804229_S_NODE_106660_length_197_cov_1.870130_g105702_i0 | PRJNA804229 | 106660 | 197 | 1.87013 | 3.6841561 | Legionella pneumophila | 446 | Bacteria | Bacteria | 45.8 | 3.34e-4 | NR | WP_303262480.1 | 446 | g105702 | i0 | 45.8 | 0.730964467005076 | 48 | 22 | 68.5 | 2 | 59 | 193 | 33 | 79 | WP_303262480.1 hypothetical protein, partial [Legionella pneumophila] | diamond | 144 | 45.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Legionellales | Legionellaceae | Legionella | Legionella pneumophila | ||
| 32875634 | 32875634 | PRJNA804229_S_NODE_154020_length_164_cov_1.942149_g153062_i0 | PRJNA804229 | 154020 | 164 | 1.942149 | 3.18512436 | root | 1 | Root_unresolved | Root_unresolved | 47 | 7.08e-5 | NR | WP_182603947.1 | 573 | g153062 | i0 | 55 | 2.08536585365854 | 40 | 18 | 73.2 | 0 | 130 | 11 | 32 | 71 | WP_182603947.1 hypothetical protein, partial [Klebsiella pneumoniae] | diamond | 342 | 47.4 | 0.991561181434599 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;