RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA804229" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA804229 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28759439 28759439 PRJNA804229_S_NODE_143587_length_170_cov_1.889764_g142629_i0 PRJNA804229 143587 170 1.889764 3.2125988 Paragonimus heterotremus 100268 Platyhelminthes Platyhelminthes 40 0.0461   NR KAF5394634.1 100268 g142629 i0 42.5 0.705882352941177 40 17 70.6 1 19 138 43 76 KAF5394634.1 Zinc finger C3HC4 type [Paragonimus heterotremus] diamond 120 40 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus heterotremus
31033936 31033936 PRJNA804229_S_NODE_120955_length_185_cov_2.711268_g119997_i0 PRJNA804229 120955 185 2.711268 5.0158458 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 128 3.65e-33   NR AAX28387.3 6182 g119997 i0 100 2.96756756756757 61 0 98.9 0 185 3 438 498 AAX28387.3 SJCHGC01615 protein, partial [Schistosoma japonicum] diamond 549 128 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;