RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA804229" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA804229 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12282199 12282199 PRJNA804229_S_NODE_156010_length_163_cov_1.600000_g155052_i0 PRJNA804229 156010 163 1.6 2.608 Alyxoria varia 91480 Fungi Fungi 90.5 1.89e-19   NR KAI9658145.1 91480 g155052 i0 85.2 0.993865030674847 54 8 99.4 0 163 2 445 498 KAI9658145.1 MAG: hypothetical protein M1831_003991 [Alyxoria varia] diamond 162 90.5 1 Eukaryota Opisthokonta Fungi Ascomycota Arthoniomycetes Arthoniales Lecanographaceae Alyxoria Alyxoria varia
26673975 26673975 PRJNA804229_S_NODE_126121_length_182_cov_1.035971_g125163_i0 PRJNA804229 126121 182 1.035971 1.88546722 Akanthomyces lecanii 2714763 Fungi Fungi 85.9 1.03e-17   NR OAQ99103.1 2714763 g125163 i0 74.1 0.89010989010989 54 14 89 0 181 20 151 204 OAQ99103.1 hypothetical protein LLEC1_02359 [Akanthomyces lecanii] diamond 162 85.9 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Cordycipitaceae Akanthomyces Akanthomyces lecanii
29833027 29833027 PRJNA804229_S_NODE_137551_length_174_cov_1.427481_g136593_i0 PRJNA804229 137551 174 1.427481 2.48381694 Epicoccum nigrum 105696 Fungi Fungi 62.4 1.68e-9   NR OSS48118.1 105696 g136593 i0 82.9 0.603448275862069 35 6 60.3 0 2 106 449 483 OSS48118.1 hypothetical protein B5807_06533 [Epicoccum nigrum] diamond 105 62.4 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Epicoccum Epicoccum nigrum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;