RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA801875" and tax_superkingdom = "Viruses"

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tax_kingdom 2

tax_superkingdom 1

  • Viruses · 3 ✖

bioproject 1

  • PRJNA801875 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27631797 27631797 PRJNA801875_P_NODE_4184_length_160_cov_1.224000_g4081_i0 PRJNA801875 4184 160 1.224 1.9584 Lenarviricota 2732407 Viruses Viruses 59.7 1.26e-8   NR URG16528.1 2027243 g4081 i0 48.1 2.85 52 27 97.5 0 4 159 486 537 URG16528.1 MAG: RNA dependent RNA polymerase, partial [Leviviridae sp.] diamond 456 59.7 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
28980715 28980715 PRJNA801875_P_NODE_2288_length_232_cov_1.040609_g2185_i0 PRJNA801875 2288 232 1.040609 2.41421288 Escherichia phage Copypasta 3096133 Viruses Viruses 84 1.62e-19   NR WPH57058.1 3096133 g2185 i0 71.4 0.724137931034483 56 16 72.4 0 212 45 1 56 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 168 84 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
31539630 31539630 PRJNA801875_P_NODE_3936_length_165_cov_1.476923_g3833_i0 PRJNA801875 3936 165 1.476923 2.43692295 Flumine hepe-like virus 2 2941073 Viruses Viruses 42 0.0256   NR UQB76018.1 2941073 g3833 i0 44.7 0.690909090909091 38 21 69.1 0 52 165 1006 1043 UQB76018.1 non-structural polyprotein [Flumine hepe-like virus 2] diamond 114 42 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales Hepeviridae   Flumine hepe-like virus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;