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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA801875" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA801875 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
801080 801080 PRJNA801875_P_NODE_81_length_1481_cov_6.591286_g51_i0 PRJNA801875 81 1481 6.591286 97.61694566 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 175 6.13e-46   NR CAH0474084.1 622444 g51 i0 39.5 5.97771775827144 294 161 58.9 7 1365 493 60 339 CAH0474084.1 unnamed protein product [Peronospora belbahrii] diamond 8853 176 0.994318181818182 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora belbahrii
6325723 6325723 PRJNA801875_P_NODE_1105_length_385_cov_1.637143_g1002_i0 PRJNA801875 1105 385 1.637143 6.30300055 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 213 7.02e-64   NR DAZ95461.1 4803 g1002 i0 79.7 38.8987012987013 128 26 99.7 0 1 384 239 366 DAZ95461.1 TPA: hypothetical protein N0F65_002146 [Lagenidium giganteum] diamond 14976 214 0.995327102803738 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
7179387 7179387 PRJNA801875_P_NODE_1786_length_280_cov_2.355102_g1683_i0 PRJNA801875 1786 280 2.355102 6.5942856 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 147 1.65e-40   NR TMW60420.1 41045 g1683 i0 78.9 5.51785714285714 90 19 96.4 0 279 10 52 141 TMW60420.1 hypothetical protein Poli38472_000462 [Pythium oligandrum] diamond 1545 147 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
18652535 18652535 PRJNA801875_P_NODE_2355_length_227_cov_3.062500_g2252_i0 PRJNA801875 2355 227 3.0625 6.951875 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 87.8 1.54e-20   NR KAJ8561724.1 4785 g2252 i0 64.8 10.3876651982379 71 25 93.8 0 4 216 18 88 KAJ8561724.1 hypothetical protein ON010_g7958 [Phytophthora cinnamomi] diamond 2358 88.2 0.99546485260771 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
26705710 26705710 PRJNA801875_P_NODE_1241_length_361_cov_2.674847_g1138_i0 PRJNA801875 1241 361 2.674847 9.65619767 Phytophthora lilii 2077276 SAR_Eukaryotes SAR_Eukaryotes 49.7 4.48e-4   NR GMF15501.1 2077276 g1138 i0 40.4 0.947368421052632 114 44 94.7 4 342 1 36 125 GMF15501.1 unnamed protein product [Phytophthora lilii] diamond 342 49.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora lilii
26705711 26705711 PRJNA801875_P_NODE_1841_length_274_cov_3.020921_g1738_i0 PRJNA801875 1841 274 3.020921 8.27732354 Peronosclerospora sorghi 230839 SAR_Eukaryotes SAR_Eukaryotes 125 5.4e-32   NR KAI9905651.1 230839 g1738 i0 62.5 1.91605839416058 88 33 96.4 0 271 8 154 241 KAI9905651.1 hypothetical protein PsorP6_013937 [Peronosclerospora sorghi] diamond 525 125 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronosclerospora Peronosclerospora sorghi
26968041 26968041 PRJNA801875_P_NODE_122_length_1242_cov_7.042254_g77_i0 PRJNA801875 122 1242 7.042254 87.46479468 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 447 9.77e-153   NR TMW57229.1 41045 g77 i0 58.8 9.67391304347826 364 148 87.4 2 1242 157 10 373 TMW57229.1 hypothetical protein Poli38472_003154 [Pythium oligandrum] diamond 12015 447 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
27528065 27528065 PRJNA801875_P_NODE_3183_length_185_cov_2.266667_g3080_i0 PRJNA801875 3183 185 2.266667 4.19333395 Plasmopara halstedii 4781 SAR_Eukaryotes SAR_Eukaryotes 82 2.46e-16   NR XP_024572435.1 4781 g3080 i0 65.6 4.94594594594595 61 21 98.9 0 3 185 542 602 XP_024572435.1 atp-binding cassette superfamily [Plasmopara halstedii] diamond 915 82 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
27852653 27852653 PRJNA801875_P_NODE_3284_length_182_cov_1.455782_g3181_i0 PRJNA801875 3284 182 1.455782 2.64952324 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 103 6.58e-24   NR KAF0742836.1 100861 g3181 i0 85.7 8.57142857142857 56 8 92.3 0 177 10 368 423 KAF0742836.1 hypothetical protein Ae201684_002234 [Aphanomyces euteiches] diamond 1560 104 0.990384615384615 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
27938678 27938678 PRJNA801875_P_NODE_4425_length_155_cov_1.925000_g4322_i0 PRJNA801875 4425 155 1.925 2.98375 Phytophthora citrophthora 4793 SAR_Eukaryotes SAR_Eukaryotes 59.7 1.13e-8   NR KAK1940843.1 4793 g4322 i0 51 4.52903225806452 51 25 98.7 0 153 1 271 321 KAK1940843.1 N-ethylmaleimide reductase [Phytophthora citrophthora] diamond 702 59.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora citrophthora
28799720 28799720 PRJNA801875_P_NODE_2567_length_213_cov_1.707865_g2464_i0 PRJNA801875 2567 213 1.707865 3.63775245 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 81.6 4.93e-16   NR RHY36540.1 112090 g2464 i0 84.4 3.80281690140845 45 7 63.4 0 212 78 1490 1534 RHY36540.1 hypothetical protein DYB38_010883, partial [Aphanomyces astaci] diamond 810 82 0.995121951219512 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
29588957 29588957 PRJNA801875_P_NODE_3270_length_182_cov_2.700680_g3167_i0 PRJNA801875 3270 182 2.70068 4.9152376 Pythiaceae 4782 SAR_Eukaryotes SAR_Eukaryotes 100 2.12e-23   NR TMW54960.1 41045 g3167 i0 79.3 1.91208791208791 58 12 95.6 0 179 6 40 97 TMW54960.1 hypothetical protein Poli38472_014731 [Pythium oligandrum] diamond 348 100 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29778704 29778704 PRJNA801875_P_NODE_2131_length_244_cov_1.789474_g2028_i0 PRJNA801875 2131 244 1.789474 4.36631656 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 94 3.6e-20   NR KAG1689501.1 4784 g2028 i0 59.4 4.00819672131148 64 26 78.7 0 232 41 332 395 KAG1689501.1 hypothetical protein DVH05_002170 [Phytophthora capsici] diamond 978 94 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
30442310 30442310 PRJNA801875_P_NODE_793_length_472_cov_8.757437_g691_i0 PRJNA801875 793 472 8.757437 41.33510264 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 161 4.749999999999999e-43   NR XP_024573476.1 4781 g691 i0 64.7 8.6885593220339 116 41 73.7 0 54 401 533 648 XP_024573476.1 dead deah box helicase [Plasmopara halstedii] diamond 4101 162 0.993827160493827 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
30473931 30473931 PRJNA801875_P_NODE_2073_length_249_cov_2.598131_g1970_i0 PRJNA801875 2073 249 2.598131 6.46934619 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 78.6 2.49e-15   NR KAJ8578052.1 4785 g1970 i0 56.3 2.83132530120482 80 25 89.2 3 2 223 175 250 KAJ8578052.1 hypothetical protein ON010_g1153 [Phytophthora cinnamomi] diamond 705 78.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
30600024 30600024 PRJNA801875_P_NODE_313_length_819_cov_3.891582_g228_i0 PRJNA801875 313 819 3.891582 31.87205658 Pythium 4797 SAR_Eukaryotes SAR_Eukaryotes 124 7.09e-28   NR TMW55519.1 41045 g228 i0 49.6 1.35531135531136 123 60 45.1 2 5 373 201 321 TMW55519.1 hypothetical protein Poli38472_010401 [Pythium oligandrum] diamond 1110 125 0.992 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
30749268 30749268 PRJNA801875_P_NODE_54_length_1706_cov_16.640335_g29_i0 PRJNA801875 54 1706 16.640335 283.8841151 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 642 4.599999999999998e-225   NR OQS07615.1 74557 g29 i0 63.8 4.48769050410317 506 178 88.3 5 1594 89 3 507 OQS07615.1 thioredoxin reductase [Thraustotheca clavata] diamond 7656 642 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
30938996 30938996 PRJNA801875_P_NODE_2734_length_204_cov_2.284024_g2631_i0 PRJNA801875 2734 204 2.284024 4.65940896 Phytophthora nicotianae P1569 1317065 SAR_Eukaryotes SAR_Eukaryotes 57.8 1.15e-7   NR ETI32568.1 1317065 g2631 i0 50.9 5.07352941176471 57 28 83.8 0 198 28 884 940 ETI32568.1 hypothetical protein F443_20651 [Phytophthora nicotianae P1569] diamond 1035 57.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
31222992 31222992 PRJNA801875_P_NODE_3475_length_176_cov_1.560284_g3372_i0 PRJNA801875 3475 176 1.560284 2.74609984 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 63.9 5.03e-10   NR OQR84167.1 1202772 g3372 i0 51.2 0.698863636363636 41 20 69.9 0 125 3 445 485 OQR84167.1 lysine-specific demethylase PHF2 [Achlya hypogyna] diamond 123 63.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
31665905 31665905 PRJNA801875_P_NODE_1497_length_315_cov_1.457143_g1394_i0 PRJNA801875 1497 315 1.457143 4.59000045 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 52 2.19e-5   NR KAH9118556.1 100861 g1394 i0 46.5 3.28571428571429 43 23 41 0 162 290 22 64 KAH9118556.1 hypothetical protein AeMF1_008354, partial [Aphanomyces euteiches] diamond 1035 52 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
32741021 32741021 PRJNA801875_P_NODE_3300_length_181_cov_2.739726_g3197_i0 PRJNA801875 3300 181 2.739726 4.95890406 Albugo laibachii Nc14 890382 SAR_Eukaryotes SAR_Eukaryotes 53.5 2.54e-6   NR CCA15819.1 890382 g3197 i0 44.6 7.04419889502762 56 31 92.8 0 174 7 267 322 CCA15819.1 protein kinase putative [Albugo laibachii Nc14] diamond 1275 53.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;