RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA801875" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA801875 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27338760 27338760 PRJNA801875_P_NODE_3263_length_183_cov_0.804054_g3160_i0 PRJNA801875 3263 183 0.804054 1.47141882 Helobdella robusta 6412 Annelida Annelida 82.8 1.19e-16   NR XP_009030488.1 6412 g3160 i0 65.5 3.78688524590164 58 20 95.1 0 182 9 114 171 XP_009030488.1 hypothetical protein HELRODRAFT_108446 [Helobdella robusta] diamond 693 82.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
31358731 31358731 PRJNA801875_P_NODE_3116_length_188_cov_1.758170_g3013_i0 PRJNA801875 3116 188 1.75817 3.3053596 Opisthokonta 33154 Annelida Annelida 119 1.31e-30   NR ABI13254.1 169120 g3013 i0 87.1 18.781914893617 62 8 98.9 0 186 1 260 321 ABI13254.1 elongation factor-1 alpha, partial [Ophryotrocha labronica] diamond 3531 120 0.991666666666667 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Eunicida Dorvilleidae Ophryotrocha Ophryotrocha labronica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;