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contig_metadata

33 rows where analysis = "diamond", bioproject = "PRJNA801875" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 33 ✖

bioproject 1

  • PRJNA801875 · 33 ✖

analysis 1

  • diamond · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2497272 2497272 PRJNA801875_P_NODE_1722_length_286_cov_3.199203_g1619_i0 PRJNA801875 1722 286 3.199203 9.14972058 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 114 2.5200000000000003e-27   NR XP_004348463.1 1257118 g1619 i0 60.4 1.00699300699301 96 36 98.6 1 3 284 265 360 XP_004348463.1 DEAD box RNA helicase [Acanthamoeba castellanii str. Neff] diamond 288 114 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8454039 8454039 PRJNA801875_P_NODE_107_length_1348_cov_8.559025_g66_i0 PRJNA801875 107 1348 8.559025 115.375657 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 739 2.64e-266   NR PRP87501.1 1890364 g66 i0 84.5 13.1038575667656 432 67 96.1 0 1 1296 1 432 PRP87501.1 elongation factor 1 alpha [Planoprotostelium fungivorum] diamond 17664 739 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
9729152 9729152 PRJNA801875_P_NODE_2448_length_221_cov_3.634409_g2345_i0 PRJNA801875 2448 221 3.634409 8.03204389 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 115 4.5e-29   NR XP_004338972.1 1257118 g2345 i0 73.8 3.2579185520362 80 13 97.7 1 218 3 74 153 XP_004338972.1 adenine nucleotide translocator, putative [Acanthamoeba castellanii str. Neff] diamond 720 115 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11004971 11004971 PRJNA801875_P_NODE_1749_length_283_cov_2.826613_g1646_i0 PRJNA801875 1749 283 2.826613 7.99931479 Physarum polycephalum 5791 Evosea other_Eukaryota 148 4.469999999999999e-42   NR ABL84200.1 5791 g1646 i0 82.6 3.8904593639576 92 16 97.5 0 5 280 6 97 ABL84200.1 14-3-3-like protein [Physarum polycephalum] diamond 1101 148 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
11004984 11004984 PRJNA801875_P_NODE_29_length_2161_cov_6.555503_g7_i1 PRJNA801875 29 2161 6.555503 141.66441983000001 Dictyosteliales 2058949 Evosea other_Eukaryota 581 2.62e-192   NR XP_003293965.1 5786 g7 i1 46.1 7.07033780657103 722 366 99.5 7 2153 3 96 799 XP_003293965.1 uncharacterized protein DICPUDRAFT_42780, partial [Dictyostelium purpureum] diamond 15279 584 0.99486301369863 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
16103573 16103573 PRJNA801875_P_NODE_1173_length_372_cov_2.308605_g1070_i0 PRJNA801875 1173 372 2.308605 8.5880106 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 64.3 4.38e-9   NR PRP87737.1 1890364 g1070 i0 38.6 1.0241935483871 127 74 99.2 3 371 3 498 624 PRP87737.1 putative nucleolar GTP-binding protein 1-like [Planoprotostelium fungivorum] diamond 381 64.3 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
17379478 17379478 PRJNA801875_P_NODE_3934_length_165_cov_1.692308_g3831_i0 PRJNA801875 3934 165 1.692308 2.7923082 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 76.3 7.27e-15   NR XP_004355015.1 1257118 g3831 i0 68.5 2.90909090909091 54 17 98.2 0 164 3 212 265 XP_004355015.1 Factin-capping protein subunit beta, putative [Acanthamoeba castellanii str. Neff] diamond 480 76.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19927860 19927860 PRJNA801875_P_NODE_16_length_2632_cov_5.820947_g7_i0 PRJNA801875 16 2632 5.820947 153.20732504 Dictyosteliaceae 2058185 Evosea other_Eukaryota 572 1.18e-186   NR XP_003293965.1 5786 g7 i0 44.7 6.99734042553191 748 390 84.6 8 405 2630 7 736 XP_003293965.1 uncharacterized protein DICPUDRAFT_42780, partial [Dictyostelium purpureum] diamond 18417 572 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
19927865 19927865 PRJNA801875_P_NODE_1916_length_267_cov_1.827586_g1813_i0 PRJNA801875 1916 267 1.827586 4.87965462 Eumycetozoa 142796 Evosea other_Eukaryota 89.4 2.01e-18   NR KAF2069460.1 133409 g1813 i0 70.3 5.03370786516854 64 19 71.9 0 5 196 524 587 KAF2069460.1 hypothetical protein CYY_009224 [Polysphondylium violaceum] diamond 1344 89.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
25027611 25027611 PRJNA801875_P_NODE_40_length_1863_cov_6.299234_g20_i0 PRJNA801875 40 1863 6.299234 117.35472942 root 1 Root_unresolved Root_unresolved 541 2.16e-184   NR YP_009557814.1 1443144 g20 i0 62.4 33.3590982286634 450 158 71.2 3 1465 140 33 479 YP_009557814.1 hypothetical protein [Paravannella minima] diamond 62148 541 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
26737193 26737193 PRJNA801875_P_NODE_2661_length_208_cov_1.930636_g2558_i0 PRJNA801875 2661 208 1.930636 4.01572288 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 72 1.13e-12   NR XP_012757931.1 1410327 g2558 i0 53 1.88942307692308 66 31 95.2 0 204 7 178 243 XP_012757931.1 hypothetical protein SAMD00019534_018860 [Acytostelium subglobosum LB1] diamond 393 72 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
27054213 27054213 PRJNA801875_P_NODE_2962_length_194_cov_2.220126_g2859_i0 PRJNA801875 2962 194 2.220126 4.30704444 Cavenderia fasciculata 261658 Evosea other_Eukaryota 44.7 0.00395   NR XP_004357528.1 261658 g2859 i0 50 0.43298969072165 28 14 43.3 0 7 90 270 297 XP_004357528.1 putative protein serine/threonine kinase [Cavenderia fasciculata] diamond 84 44.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
27063025 27063025 PRJNA801875_P_NODE_1662_length_293_cov_4.643411_g1559_i0 PRJNA801875 1662 293 4.643411 13.60519423 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 119 3.3399999999999996e-32   NR KAH3756789.1 1580589 g1559 i0 70.8 11.6723549488055 96 28 98.3 0 289 2 6 101 KAH3756789.1 ribosomal protein L35 [Pelomyxa schiedti] diamond 3420 119 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
27157521 27157521 PRJNA801875_P_NODE_3702_length_170_cov_1.962963_g3599_i0 PRJNA801875 3702 170 1.962963 3.3370371 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 80.1 2.11e-16   NR AEL74960.1 180228 g3599 i0 64.3 4.94117647058824 56 20 98.8 0 168 1 141 196 AEL74960.1 elongation factor 2, partial [Paramoeba pemaquidensis] diamond 840 80.9 0.990111248454882 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
27465124 27465124 PRJNA801875_P_NODE_883_length_446_cov_1.880779_g781_i0 PRJNA801875 883 446 1.880779 8.38827434 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 50.4 6.69e-4   NR KYR03059.1 361077 g781 i0 31.9 0.800448430493274 119 76 79.4 3 441 88 1265 1379 KYR03059.1 myb domain-containing protein [Tieghemostelium lacteum] diamond 357 50.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
28380588 28380588 PRJNA801875_P_NODE_1946_length_262_cov_2.387665_g1843_i0 PRJNA801875 1946 262 2.387665 6.2556823 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 119 2.24e-32   NR 7SOG_A 5755 g1843 i0 59.3 2.96564885496183 86 35 98.5 0 4 261 3 88 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 777 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28664851 28664851 PRJNA801875_P_NODE_4507_length_154_cov_1.285714_g4404_i0 PRJNA801875 4507 154 1.285714 1.97999956 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 60.8 4.33e-9   NR PRP78126.1 1890364 g4404 i0 78.8 1.4025974025974 33 7 64.3 0 30 128 20 52 PRP78126.1 inactive ubiquitin carboxyl-terminal hydrolase 54-like [Planoprotostelium fungivorum] diamond 216 60.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29359492 29359492 PRJNA801875_P_NODE_2449_length_221_cov_1.725806_g2346_i0 PRJNA801875 2449 221 1.725806 3.81403126 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 66.2 1.45e-10   NR XP_004334405.1 1257118 g2346 i0 58.2 0.746606334841629 55 22 74.7 1 53 217 338 391 XP_004334405.1 DEAD/DEAH box helicase domain containing protein [Acanthamoeba castellanii str. Neff] diamond 165 66.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29801322 29801322 PRJNA801875_P_NODE_2751_length_204_cov_0.905325_g2648_i0 PRJNA801875 2751 204 0.905325 1.846863 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 57 2.14e-7   NR XP_012755423.1 1410327 g2648 i0 43.9 1.91176470588235 66 34 97.1 2 204 7 529 591 XP_012755423.1 hypothetical protein SAMD00019534_044790 [Acytostelium subglobosum LB1] diamond 390 57 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
29927969 29927969 PRJNA801875_P_NODE_4431_length_155_cov_1.783333_g4328_i0 PRJNA801875 4431 155 1.783333 2.76416615 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 69.3 8.29e-13   NR XP_004349728.1 1257118 g4328 i0 62 0.967741935483871 50 19 96.8 0 150 1 117 166 XP_004349728.1 Rho family, small GTP binding protein Rac3, putative [Acanthamoeba castellanii str. Neff] diamond 150 69.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29959342 29959342 PRJNA801875_P_NODE_411_length_697_cov_2.998489_g316_i0 PRJNA801875 411 697 2.998489 20.89946833 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 196 4.77e-59   NR XP_004340229.1 1257118 g316 i0 60.2 0.822094691535151 191 64 78.3 5 21 566 9 196 XP_004340229.1 ribosomal protein L6e, putative [Acanthamoeba castellanii str. Neff] diamond 573 196 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30117220 30117220 PRJNA801875_P_NODE_2912_length_196_cov_3.062112_g2809_i0 PRJNA801875 2912 196 3.062112 6.00173952 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 94.4 1.09e-21   NR PRP83381.1 1890364 g2809 i0 68.9 0.933673469387755 61 19 93.4 0 191 9 172 232 PRP83381.1 ribosomal protein S3a, component of cytosolic 80S ribosome and 40S small subunit [Planoprotostelium fungivorum] diamond 183 94.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30243866 30243866 PRJNA801875_P_NODE_3512_length_175_cov_1.135714_g3409_i0 PRJNA801875 3512 175 1.135714 1.9874995 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.9 2.95e-8   NR XP_004334239.1 1257118 g3409 i0 68.6 0.6 35 11 60 0 4 108 604 638 XP_004334239.1 MYC binding protein 2, putative [Acanthamoeba castellanii str. Neff] diamond 105 58.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30370567 30370567 PRJNA801875_P_NODE_4712_length_151_cov_1.301724_g4609_i0 PRJNA801875 4712 151 1.301724 1.96560324 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 62 1.62e-9   NR PRP84049.1 1890364 g4609 i0 51 0.973509933774834 49 24 97.4 0 149 3 538 586 PRP84049.1 SH2 domain-containing protein [Planoprotostelium fungivorum] diamond 147 62 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30402158 30402158 PRJNA801875_P_NODE_2033_length_253_cov_1.422018_g1930_i0 PRJNA801875 2033 253 1.422018 3.59770554 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 83.2 1.82e-17   NR PRP86688.1 1890364 g1930 i0 48.8 1.9802371541502 86 42 99.6 2 252 1 103 188 PRP86688.1 hypothetical protein PROFUN_05167 [Planoprotostelium fungivorum] diamond 501 83.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30528020 30528020 PRJNA801875_P_NODE_2633_length_209_cov_2.896552_g2530_i0 PRJNA801875 2633 209 2.896552 6.05379368 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 62 9.49e-11   NR XP_004337533.1 1257118 g2530 i0 44.6 0.933014354066986 65 36 93.3 0 197 3 1 65 XP_004337533.1 uncharacterized protein ACA1_163480 [Acanthamoeba castellanii str. Neff] diamond 195 62 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30559457 30559457 PRJNA801875_P_NODE_3773_length_169_cov_0.873134_g3670_i0 PRJNA801875 3773 169 0.873134 1.47559646 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 77.8 6.07e-15   NR KYR01170.1 361077 g3670 i0 66.7 0.958579881656805 54 18 95.9 0 5 166 347 400 KYR01170.1 dynamin like protein [Tieghemostelium lacteum] diamond 162 77.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30654346 30654346 PRJNA801875_P_NODE_3373_length_179_cov_2.361111_g3270_i0 PRJNA801875 3373 179 2.361111 4.22638869 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.8 0.0013   NR XP_004336217.1 1257118 g3270 i0 49 0.82122905027933 49 25 82.1 0 154 8 222 270 XP_004336217.1 SH2 domain containing protein [Acanthamoeba castellanii str. Neff] diamond 147 45.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30938995 30938995 PRJNA801875_P_NODE_2154_length_242_cov_1.487923_g2051_i0 PRJNA801875 2154 242 1.487923 3.60077366 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 137 3.8e-39   NR XP_004368112.1 1257118 g2051 i0 82.2 3.6198347107438 73 13 90.5 0 22 240 1 73 XP_004368112.1 ribosomal protein L24e, putative [Acanthamoeba castellanii str. Neff] diamond 876 137 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30970556 30970556 PRJNA801875_P_NODE_4114_length_161_cov_1.841270_g4011_i0 PRJNA801875 4114 161 1.84127 2.9644447 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 69.7 3.46e-12   NR XP_004339463.1 1257118 g4011 i0 64.7 0.950310559006211 51 18 95 0 156 4 327 377 XP_004339463.1 Rad23, putative [Acanthamoeba castellanii str. Neff] diamond 153 69.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31919112 31919112 PRJNA801875_P_NODE_2397_length_225_cov_0.821053_g2294_i0 PRJNA801875 2397 225 0.821053 1.84736925 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57 2.87e-7   NR XP_004367975.1 1257118 g2294 i0 39.7 0.973333333333333 73 43 97.3 1 4 222 578 649 XP_004367975.1 tetratricopeptide repeat domain containing protein [Acanthamoeba castellanii str. Neff] diamond 219 57 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32457136 32457136 PRJNA801875_P_NODE_2819_length_201_cov_1.162651_g2716_i0 PRJNA801875 2819 201 1.162651 2.33692851 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 85.9 1.4e-17   NR XP_012759216.1 1410327 g2716 i0 50 1.97014925373134 66 33 98.5 0 201 4 868 933 XP_012759216.1 hypothetical protein SAMD00019534_003290 [Acytostelium subglobosum LB1] diamond 396 85.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
32488820 32488820 PRJNA801875_P_NODE_3519_length_175_cov_1.000000_g3416_i0 PRJNA801875 3519 175 1 1.75 Polysphondylium violaceum 133409 Evosea other_Eukaryota 64.7 1.59e-11   NR KAF2074250.1 133409 g3416 i0 74.4 1.45714285714286 43 11 73.7 0 131 3 6 48 KAF2074250.1 hypothetical protein CYY_004424 [Polysphondylium violaceum] diamond 255 64.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;