RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA800090" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 22 ✖

bioproject 1

  • PRJNA800090 · 22 ✖

analysis 1

  • diamond · 22 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27220804 27220804 PRJNA800090_P_NODE_133862_length_273_cov_1.225490_g131677_i0 PRJNA800090 133862 273 1.22549 3.3455877 Betanucleorhabdovirus 2733248 Viruses Viruses 148 5.739999999999999e-40   NR DAF42413.1 2793726 g131677 i0 69.7 7.82417582417582 89 27 97.8 0 5 271 87 175 DAF42413.1 TPA_asm: G, partial [Cuscuta virus 1] diamond 2136 149 0.993288590604027 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Cuscuta virus 1
27284307 27284307 PRJNA800090_P_NODE_149183_length_257_cov_1.164894_g146998_i0 PRJNA800090 149183 257 1.164894 2.99377758 Viruses 10239 Viruses Viruses 95.9 2.22e-21   NR DAF42409.1 2793726 g146998 i0 56 7.8443579766537 84 37 98.1 0 3 254 14 97 DAF42409.1 TPA_asm: P [Cuscuta virus 1] diamond 2016 96.3 0.995846313603323 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Cuscuta virus 1
27496578 27496578 PRJNA800090_P_NODE_171703_length_236_cov_2.353293_g169518_i0 PRJNA800090 171703 236 2.353293 5.55377148 Salmonella phage SSBI34 2861009 Viruses Viruses 43.9 0.00176   NR QYC52643.1 2861009 g169518 i0 55.3 0.483050847457627 38 17 48.3 0 123 236 1 38 QYC52643.1 hypothetical protein [Salmonella phage SSBI34] diamond 114 43.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Salmonella phage SSBI34
27717932 27717932 PRJNA800090_P_NODE_37904_length_604_cov_4.822430_g35751_i0 PRJNA800090 37904 604 4.82243 29.1274772 Sambucus betanucleorhabdovirus 4 3141832 Viruses Viruses 164 1.98e-43   NR XBH23539.1 3141832 g35751 i0 45.4 5.53807947019868 185 99 91.9 1 3 557 447 629 XBH23539.1 MAG: glycoprotein [Sambucus betanucleorhabdovirus 4] diamond 3345 164 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Betanucleorhabdovirus Sambucus betanucleorhabdovirus 4
27843659 27843659 PRJNA800090_P_NODE_55024_length_476_cov_2.449631_g52840_i0 PRJNA800090 55024 476 2.449631 11.66024356 Tomato betanucleorhabdovirus 2 2950851 Viruses Viruses 97.4 8.09e-21   NR UTQ50536.1 2950851 g52840 i0 42.9 1.96008403361345 105 60 66.2 0 1 315 227 331 UTQ50536.1 MAG: phosphoprotein [Tomato betanucleorhabdovirus 2] diamond 933 97.4 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Betanucleorhabdovirus Betanucleorhabdovirus betalycopersici
28222521 28222521 PRJNA800090_P_NODE_22706_length_832_cov_3.840105_g20820_i0 PRJNA800090 22706 832 3.840105 31.9496736 Sambucus betanucleorhabdovirus 1 3141829 Viruses Viruses 390 2.21e-131   NR XBH23499.1 3141829 g20820 i0 74.3 3.80048076923077 265 65 95.6 1 830 36 196 457 XBH23499.1 MAG: nucleoprotein [Sambucus betanucleorhabdovirus 1] diamond 3162 390 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Betanucleorhabdovirus Sambucus betanucleorhabdovirus 1
29075381 29075381 PRJNA800090_P_NODE_163348_length_243_cov_4.126437_g161163_i0 PRJNA800090 163348 243 4.126437 10.02724191 Escherichia phage vB_EcoS-Ro145c2YLVW 2144178 Viruses Viruses 126 1.0599999999999998e-31   NR YP_010749480.1 2144178 g161163 i0 89.4 8.95061728395062 66 7 81.5 0 46 243 1 66 YP_010749480.1 hypothetical protein QCF77_gp51 [Escherichia phage vB_EcoS-Ro145c2YLVW] diamond 2175 126 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Sarkviridae Kagunavirus Escherichia phage vB_EcoS-Ro145c2YLVW
29106864 29106864 PRJNA800090_P_NODE_181448_length_232_cov_1.625767_g179263_i0 PRJNA800090 181448 232 1.625767 3.77177944 Marseillevirus LCMAC2 2506606 Viruses Viruses 60.8 8.15e-9   NR QBK87781.1 2506606 g179263 i0 39.1 1.82327586206897 69 42 89.2 0 213 7 108 176 QBK87781.1 MAG: hypothetical protein LCMAC202_01170 [Marseillevirus LCMAC202] diamond 423 60.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Marseilleviridae   Marseillevirus LCMAC202
29170067 29170067 PRJNA800090_P_NODE_196729_length_220_cov_2.278146_g194544_i0 PRJNA800090 196729 220 2.278146 5.0119212 Escherichia phage Copypasta 3096133 Viruses Viruses 64.7 5.77e-12   NR WPH57058.1 3096133 g194544 i0 73.2 0.559090909090909 41 11 55.9 0 128 6 5 45 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 123 64.7 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
29422305 29422305 PRJNA800090_P_NODE_190029_length_229_cov_0.912500_g187844_i0 PRJNA800090 190029 229 0.9125 2.089625 uncultured virus 340016 Viruses Viruses 47 6.59e-4   NR CAH6421660.1 340016 g187844 i0 45.8 0.62882096069869 48 25 62.9 1 82 225 73 119 CAH6421660.1 START domain-containing protein [uncultured virus] diamond 144 47 1 Viruses               uncultured virus
29864503 29864503 PRJNA800090_P_NODE_121311_length_290_cov_1.321267_g119126_i0 PRJNA800090 121311 290 1.321267 3.8316743 Hyperionvirus sp. 2487770 Viruses Viruses 57 6.05e-7   NR AYV82548.1 2487770 g119126 i0 38.9 0.982758620689655 95 55 95.2 2 9 284 193 287 AYV82548.1 MAG: chromosome condensation regulator [Hyperionvirus sp.] diamond 285 57 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Hyperionvirus sp.
29896271 29896271 PRJNA800090_P_NODE_33031_length_659_cov_3.103390_g30910_i0 PRJNA800090 33031 659 3.10339 20.4513401 Actinidia seed-borne latent like virus 2715797 Viruses Viruses 210 1.22e-58   NR QJD14857.1 2715797 g30910 i0 56.7 2.02124430955994 224 81 97.9 4 657 13 459 675 QJD14857.1 replicase [Actinidia seed-borne latent like virus] diamond 1332 210 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Actinidia seed-borne latent like virus
30717518 30717518 PRJNA800090_P_NODE_49574_length_509_cov_3.138636_g47393_i0 PRJNA800090 49574 509 3.138636 15.97565724 Beet betanucleorhabdovirus 1 3064197 Viruses Viruses 66.6 3.09e-9   NR WKW47887.1 3064197 g47393 i0 29.1 0.931237721021611 158 107 92.5 3 471 1 1834 1987 WKW47887.1 RNA-dependent RNA polymerase [Beet betanucleorhabdovirus 1] diamond 474 66.6 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Betanucleorhabdovirus Beet betanucleorhabdovirus 1
30938961 30938961 PRJNA800090_P_NODE_64414_length_430_cov_1.523546_g62230_i0 PRJNA800090 64414 430 1.523546 6.5512478 Pandoravirus japonicus 2823154 Viruses Viruses 138 1.61e-35   NR BCU03046.1 2823154 g62230 i0 44.8 1.01162790697674 145 76 99.1 2 3 428 51 194 BCU03046.1 hypothetical protein [Pandoravirus japonicus] diamond 435 138 1 Viruses             Pandoravirus Pandoravirus japonicus
30970487 30970487 PRJNA800090_P_NODE_130174_length_277_cov_2.807692_g127989_i0 PRJNA800090 130174 277 2.807692 7.77730684 Beet betanucleorhabdovirus 1 3064197 Viruses Viruses 126 1.3399999999999998e-31   NR WKW47886.1 3064197 g127989 i0 65.9 2.77256317689531 85 29 92.1 0 275 21 282 366 WKW47886.1 glycoprotein [Beet betanucleorhabdovirus 1] diamond 768 126 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Betanucleorhabdovirus Beet betanucleorhabdovirus 1
31074160 31074160 PRJNA800090_P_NODE_40415_length_580_cov_2.800391_g38256_i0 PRJNA800090 40415 580 2.800391 16.2422678 Betanucleorhabdovirus 2733248 Viruses Viruses 251 4.22e-78   NR CAI5383865.1 2933137 g38256 i0 63.2 4.97586206896552 193 70 99.8 1 2 580 29 220 CAI5383865.1 N putative nucleocapid, partial [Common ivy rhabdovirus] diamond 2886 251 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Common ivy rhabdovirus
31801227 31801227 PRJNA800090_P_NODE_75117_length_389_cov_3.471875_g72932_i0 PRJNA800090 75117 389 3.471875 13.50559375 Betanucleorhabdovirus 2733248 Viruses Viruses 111 1.53e-25   NR UTQ50577.1 2950850 g72932 i0 46.5 3.84061696658098 127 68 97.9 0 382 2 1976 2102 UTQ50577.1 MAG: RNA-dependent RNA polymerase [Tomato betanucleorhabdovirus 1] diamond 1494 111 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Betanucleorhabdovirus Betanucleorhabdovirus alphalycopersici
32267232 32267232 PRJNA800090_P_NODE_115018_length_299_cov_3.173913_g112833_i0 PRJNA800090 115018 299 3.173913 9.48999987 Tomato betanucleorhabdovirus 2 2950851 Viruses Viruses 155 2.19e-44   NR UTQ50538.1 2950851 g112833 i0 70.4 1.96655518394649 98 28 98.3 1 298 5 138 234 UTQ50538.1 MAG: matrix protein [Tomato betanucleorhabdovirus 2] diamond 588 155 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Betanucleorhabdovirus Betanucleorhabdovirus betalycopersici
32402668 32402668 PRJNA800090_P_NODE_10919_length_1226_cov_2.421780_g9701_i0 PRJNA800090 10919 1226 2.42178 29.6910228 Pandoravirus 2060084 Viruses Viruses 252 7.97e-75   NR YP_009481523.1 2107707 g9701 i0 36.2 2.96084828711256 403 238 94.5 8 69 1226 46 446 YP_009481523.1 hypothetical protein pmac_cds_839 [Pandoravirus macleodensis] diamond 3630 252 1 Viruses             Pandoravirus Pandoravirus macleodensis
32529360 32529360 PRJNA800090_P_NODE_8239_length_1399_cov_4.766917_g7252_i0 PRJNA800090 8239 1399 4.766917 66.68916883 Betanucleorhabdovirus 2733248 Viruses Viruses 412 4.56e-139   NR DAF42410.1 2793726 g7252 i0 60.6 1.97069335239457 307 121 65.8 0 2 922 19 325 DAF42410.1 TPA_asm: P3 [Cuscuta virus 1] diamond 2757 414 0.995169082125604 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Cuscuta virus 1
32866709 32866709 PRJNA800090_P_NODE_168260_length_239_cov_1.694118_g166075_i0 PRJNA800090 168260 239 1.694118 4.04894202 Phytophthora cinnamomi ormycovirus 7-5 3239326 Viruses Viruses 86.3 1.43e-17   NR XDO01624.1 3239326 g166075 i0 51.9 0.99163179916318 79 38 99.2 0 238 2 300 378 XDO01624.1 hypothetical protein [Phytophthora cinnamomi ormycovirus 7-5] diamond 237 86.3 1 Viruses   Orthornavirae   Orpoviricetes Bormycovirales Alphaormycoviridae Phormycovirus Phormycovirus phytophthorae
32866754 32866754 PRJNA800090_S_NODE_27340_length_245_cov_1.051136_g27228_i0 PRJNA800090 27340 245 1.051136 2.5752832 Actinidia seed-borne latent like virus 2715797 Viruses Viruses 90.5 6.06e-19   NR QJD14857.1 2715797 g27228 i0 61.4 0.857142857142857 70 27 85.7 0 1 210 524 593 QJD14857.1 replicase [Actinidia seed-borne latent like virus] diamond 210 90.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Actinidia seed-borne latent like virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;