RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA800090" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA800090 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29896271 29896271 PRJNA800090_P_NODE_33031_length_659_cov_3.103390_g30910_i0 PRJNA800090 33031 659 3.10339 20.4513401 Actinidia seed-borne latent like virus 2715797 Viruses Viruses 210 1.22e-58   NR QJD14857.1 2715797 g30910 i0 56.7 2.02124430955994 224 81 97.9 4 657 13 459 675 QJD14857.1 replicase [Actinidia seed-borne latent like virus] diamond 1332 210 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Actinidia seed-borne latent like virus
32866754 32866754 PRJNA800090_S_NODE_27340_length_245_cov_1.051136_g27228_i0 PRJNA800090 27340 245 1.051136 2.5752832 Actinidia seed-borne latent like virus 2715797 Viruses Viruses 90.5 6.06e-19   NR QJD14857.1 2715797 g27228 i0 61.4 0.857142857142857 70 27 85.7 0 1 210 524 593 QJD14857.1 replicase [Actinidia seed-borne latent like virus] diamond 210 90.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae   Actinidia seed-borne latent like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;