RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA800090" and tax_kingdom = "Heunggongvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 2 ✖

bioproject 1

  • PRJNA800090 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27496578 27496578 PRJNA800090_P_NODE_171703_length_236_cov_2.353293_g169518_i0 PRJNA800090 171703 236 2.353293 5.55377148 Salmonella phage SSBI34 2861009 Viruses Viruses 43.9 0.00176   NR QYC52643.1 2861009 g169518 i0 55.3 0.483050847457627 38 17 48.3 0 123 236 1 38 QYC52643.1 hypothetical protein [Salmonella phage SSBI34] diamond 114 43.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Salmonella phage SSBI34
29075381 29075381 PRJNA800090_P_NODE_163348_length_243_cov_4.126437_g161163_i0 PRJNA800090 163348 243 4.126437 10.02724191 Escherichia phage vB_EcoS-Ro145c2YLVW 2144178 Viruses Viruses 126 1.0599999999999998e-31   NR YP_010749480.1 2144178 g161163 i0 89.4 8.95061728395062 66 7 81.5 0 46 243 1 66 YP_010749480.1 hypothetical protein QCF77_gp51 [Escherichia phage vB_EcoS-Ro145c2YLVW] diamond 2175 126 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Sarkviridae Kagunavirus Escherichia phage vB_EcoS-Ro145c2YLVW

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;