RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA800053" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA800053 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27180240 27180240 PRJNA800053_P_NODE_12382_length_284_cov_1.639810_g12218_i0 PRJNA800053 12382 284 1.63981 4.6570604 Patatavirales sp. 2809655 Viruses Viruses 51.6 4.7e-5   NR WRQ64757.1 2809655 g12218 i0 32.3 1.61619718309859 96 51 94 3 269 3 544 632 WRQ64757.1 polyprotein 2 [Patatavirales sp.] diamond 459 51.6 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales     Patatavirales sp.
32362246 32362246 PRJNA800053_P_NODE_14039_length_272_cov_1.532663_g13875_i0 PRJNA800053 14039 272 1.532663 4.16884336 Picornaviridae sp. 1530251 Viruses Viruses 92.4 1.1e-19   NR URG14603.1 1530251 g13875 i0 52.8 1.94117647058824 89 41 98.2 1 4 270 154 241 URG14603.1 MAG: structural protein, partial [Picornaviridae sp.] diamond 528 92.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Picornaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;