RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA800053" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA800053 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27978985 27978985 PRJNA800053_P_NODE_21285_length_245_cov_0.895349_g21121_i0 PRJNA800053 21285 245 0.895349 2.19360505 root 1 Root_unresolved Root_unresolved 114 2.88e-28   NR MBP04084.1 2026739 g21121 i0 68.8 4.71428571428571 77 24 94.3 0 231 1 192 268 MBP04084.1 hypothetical protein [Methanobacteriota archaeon] diamond 1155 114 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29769660 29769660 PRJNA800053_P_NODE_17471_length_251_cov_0.865169_g17307_i0 PRJNA800053 17471 251 0.865169 2.17157419 Methanosarcina sp. 2213 Archaea Archaea 50.4 7.69e-5   NR HET8689179.1 2213 g17307 i0 38.8 0.800796812749004 67 41 80.1 0 3 203 216 282 HET8689179.1 packaged DNA stabilization protein [Methanosarcina sp.] diamond 201 50.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
32488730 32488730 PRJNA800053_P_NODE_21859_length_244_cov_0.900585_g21695_i0 PRJNA800053 21859 244 0.900585 2.1974274 Archaeoglobales archaeon 2250258 Archaea Archaea 44.7 0.00562   NR RLI73566.1 2250258 g21695 i0 34.3 0.860655737704918 70 41 86.1 1 211 2 37 101 RLI73566.1 MAG: hypothetical protein DRO97_07240 [Archaeoglobales archaeon] diamond 210 44.7 1 Archaea   Methanobacteriati Methanobacteriota Archaeoglobi Archaeoglobales     Archaeoglobales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;