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contig_metadata

21 rows where analysis = "diamond", bioproject = "PRJNA800053" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 21 ✖

tax_kingdom 1

bioproject 1

  • PRJNA800053 · 21 ✖

analysis 1

  • diamond · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19923070 19923070 PRJNA800053_P_NODE_6156_length_373_cov_1.020000_g5993_i0 PRJNA800053 6156 373 1.02 3.8046 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 236 3.37e-73   NR MEO6391133.1 2283092 g5993 i0 91.8 0.981233243967828 122 10 98.1 0 370 5 175 296 MEO6391133.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPB [Pyrinomonadaceae bacterium] diamond 366 236 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26642451 26642451 PRJNA800053_P_NODE_19221_length_248_cov_0.880000_g19057_i0 PRJNA800053 19221 248 0.88 2.1824 Acidobacteriota bacterium 1978231 Bacteria Bacteria 115 7.31e-28   NR MBM3740730.1 1978231 g19057 i0 74.4 0.943548387096774 78 20 94.4 0 6 239 312 389 MBM3740730.1 ATP-dependent DNA ligase [Acidobacteriota bacterium] diamond 234 115 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26896104 26896104 PRJNA800053_P_NODE_21041_length_245_cov_0.895349_g20877_i0 PRJNA800053 21041 245 0.895349 2.19360505 Blastocatellia bacterium 2052146 Bacteria Bacteria 127 6.759999999999999e-32   NR HEX4946824.1 2052146 g20877 i0 77.8 0.991836734693878 81 17 99.2 1 243 1 40 119 HEX4946824.1 CocE/NonD family hydrolase [Blastocatellia bacterium] diamond 243 127 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
27307075 27307075 PRJNA800053_P_NODE_17883_length_250_cov_1.429379_g17719_i0 PRJNA800053 17883 250 1.429379 3.5734475 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 64.3 1.01e-9   NR HEX4278166.1 2212468 g17719 i0 47.9 0.876 73 36 87.6 1 30 248 704 774 HEX4278166.1 hypothetical protein [Bryobacteraceae bacterium] diamond 219 64.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
27465044 27465044 PRJNA800053_P_NODE_18223_length_250_cov_0.870056_g18059_i0 PRJNA800053 18223 250 0.870056 2.17514 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 132 9.01e-34   NR HRH43430.1 2283092 g18059 i0 76.5 0.972 81 19 97.2 0 246 4 922 1002 HRH43430.1 ATP-dependent helicase [Pyrinomonadaceae bacterium] diamond 243 132 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27631789 27631789 PRJNA800053_P_NODE_17784_length_250_cov_2.751412_g17620_i0 PRJNA800053 17784 250 2.751412 6.87853 Bacteria 2 Bacteria Bacteria 120 1.79e-29   NR MCC7033898.1 1978231 g17620 i0 73.2 11.808 82 22 98.4 0 3 248 171 252 MCC7033898.1 ABC transporter permease [Acidobacteriota bacterium] diamond 2952 120 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27875268 27875268 PRJNA800053_P_NODE_21905_length_244_cov_0.900585_g21741_i0 PRJNA800053 21905 244 0.900585 2.1974274 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 139 4.19e-36   NR HYZ87431.1 2212468 g21741 i0 80 0.983606557377049 80 16 98.4 0 4 243 703 782 HYZ87431.1 TonB-dependent receptor [Bryobacteraceae bacterium] diamond 240 139 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28421255 28421255 PRJNA800053_P_NODE_18886_length_249_cov_0.875000_g18722_i0 PRJNA800053 18886 249 0.875 2.17875 Pseudomonadati 3379134 Bacteria Bacteria 48.9 1.86e-4   NR MCA1631568.1 1978231 g18722 i0 100 2.3855421686747 22 0 26.5 0 69 4 1 22 MCA1631568.1 30S ribosomal protein S4 [Acidobacteriota bacterium] diamond 594 48.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28759335 28759335 PRJNA800053_P_NODE_21767_length_244_cov_0.900585_g21603_i0 PRJNA800053 21767 244 0.900585 2.1974274 Bryobacterales bacterium 2026791 Bacteria Bacteria 159 9.56e-44   NR MBL8240225.1 2026791 g21603 i0 96.3 1.9672131147541 80 3 98.4 0 241 2 98 177 MBL8240225.1 nitrite/sulfite reductase [Bryobacterales bacterium] diamond 480 159 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
29422268 29422268 PRJNA800053_P_NODE_22349_length_243_cov_0.905882_g22185_i0 PRJNA800053 22349 243 0.905882 2.20129326 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 171 1.38e-51   NR MBP9947575.1 2793154 g22185 i0 98.8 0.987654320987654 80 1 98.8 0 243 4 80 159 MBP9947575.1 FAD-dependent thymidylate synthase [Vicinamibacteria bacterium] diamond 240 171 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
29517046 29517046 PRJNA800053_P_NODE_11890_length_288_cov_1.344186_g11726_i0 PRJNA800053 11890 288 1.344186 3.87125568 Chloracidobacterium sp. 2099375 Bacteria Bacteria 68.2 5.56e-11   NR MBK8468061.1 2099375 g11726 i0 37.4 1.03125 99 56 96.9 1 285 7 136 234 MBK8468061.1 hypothetical protein [Chloracidobacterium sp.] diamond 297 68.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium sp.
29548572 29548572 PRJNA800053_P_NODE_25270_length_202_cov_4.387597_g25106_i0 PRJNA800053 25270 202 4.387597 8.86294594 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 70.1 3.46e-12   NR MCW5956494.1 2283092 g25106 i0 54.7 0.95049504950495 64 29 95 0 7 198 27 90 MCW5956494.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 192 70.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29580046 29580046 PRJNA800053_P_NODE_15950_length_259_cov_2.005376_g15786_i0 PRJNA800053 15950 259 2.005376 5.19392384 Acidobacteriota bacterium 1978231 Bacteria Bacteria 155 2.95e-46   NR MBK6725502.1 1978231 g15786 i0 90.4 0.961389961389961 83 8 96.1 0 254 6 65 147 MBK6725502.1 dihydrofolate reductase [Acidobacteriota bacterium] diamond 249 155 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30117135 30117135 PRJNA800053_P_NODE_24392_length_235_cov_2.802469_g24228_i0 PRJNA800053 24392 235 2.802469 6.58580215 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 85.5 2.92e-17   NR HEY7336992.1 2212468 g24228 i0 68.3 1.60851063829787 63 20 80.4 0 3 191 296 358 HEY7336992.1 hypothetical protein [Bryobacteraceae bacterium] diamond 378 85.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30812302 30812302 PRJNA800053_P_NODE_15214_length_264_cov_1.267016_g15050_i0 PRJNA800053 15214 264 1.267016 3.34492224 Chloracidobacterium sp. 2099375 Bacteria Bacteria 55.8 9.66e-7   NR MBK8467761.1 2099375 g15050 i0 34.2 1.76136363636364 76 49 86.4 1 259 32 9 83 MBK8467761.1 hypothetical protein [Chloracidobacterium sp.] diamond 465 55.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium sp.
31002032 31002032 PRJNA800053_P_NODE_13354_length_277_cov_1.465686_g13190_i0 PRJNA800053 13354 277 1.465686 4.05995022 Acidobacteriota bacterium 1978231 Bacteria Bacteria 169 2.38e-47   NR MCC6988999.1 1978231 g13190 i0 96.7 1.9927797833935 92 3 99.6 0 277 2 41 132 MCC6988999.1 SurA N-terminal domain-containing protein [Acidobacteriota bacterium] diamond 552 169 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31476286 31476286 PRJNA800053_P_NODE_12056_length_287_cov_1.168224_g11892_i0 PRJNA800053 12056 287 1.168224 3.35280288 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 78.2 2.2e-14   NR HEV7642598.1 2283092 g11892 i0 57 0.825783972125436 79 34 82.6 0 269 33 306 384 HEV7642598.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 237 78.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32013932 32013932 PRJNA800053_P_NODE_23878_length_241_cov_0.916667_g23714_i0 PRJNA800053 23878 241 0.916667 2.20916747 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 50.8 5.24e-5   NR HYL73830.1 2212468 g23714 i0 41.8 0.983402489626556 79 42 93.4 2 232 8 373 451 HYL73830.1 hypothetical protein [Bryobacteraceae bacterium] diamond 237 50.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
32140560 32140560 PRJNA800053_P_NODE_13818_length_274_cov_1.208955_g13654_i0 PRJNA800053 13818 274 1.208955 3.3125367 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 142 1.3999999999999996e-41   NR HMT09752.1 2283092 g13654 i0 72.7 1.93795620437956 88 24 96.4 0 4 267 37 124 HMT09752.1 DUF2203 domain-containing protein [Pyrinomonadaceae bacterium] diamond 531 142 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32149523 32149523 PRJNA800053_P_NODE_19858_length_247_cov_0.885057_g19694_i0 PRJNA800053 19858 247 0.885057 2.18609079 root 1 Root_unresolved Root_unresolved 56.2 3.51e-8   NR MDE3196541.1 1978231 g19694 i0 69.4 2.46558704453441 36 11 43.7 0 245 138 38 73 MDE3196541.1 phage terminase large subunit [Acidobacteriota bacterium] diamond 609 56.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32299046 32299046 PRJNA800053_P_NODE_18919_length_249_cov_0.875000_g18755_i0 PRJNA800053 18919 249 0.875 2.17875 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 98.6 3.08e-23   NR MEO5742285.1 2910147 g18755 i0 54.9 1.97590361445783 82 37 98.8 0 248 3 90 171 MEO5742285.1 hypothetical protein [Vicinamibacterales bacterium] diamond 492 98.6 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;