RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA799842" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA799842 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27496533 27496533 PRJNA799842_P_NODE_66083_length_351_cov_1.107914_g64510_i0 PRJNA799842 66083 351 1.107914 3.88877814 Cirlivirales sp. 2809008 Viruses Viruses 156 2.59e-44   NR XOE99365.1 2809008 g64510 i0 68.1 0.991452991452991 116 37 99.1 0 2 349 90 205 XOE99365.1 MAG: hypothetical protein [Cirlivirales sp.] diamond 348 156 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Cirlivirales     Cirlivirales sp.
29296137 29296137 PRJNA799842_P_NODE_45489_length_422_cov_1.103152_g43916_i0 PRJNA799842 45489 422 1.103152 4.65530144 Cressdnaviricota sp. 2748378 Viruses Viruses 114 3.96e-28   NR UOF76854.1 2748378 g43916 i0 55.3 1.61374407582938 114 49 79.6 1 87 422 54 167 UOF76854.1 capsid protein [Cressdnaviricota sp.] diamond 681 114 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.
29778674 29778674 PRJNA799842_P_NODE_157311_length_247_cov_0.885057_g155738_i0 PRJNA799842 157311 247 0.885057 2.18609079 Begomovirus 10814 Viruses Viruses 87 5.09e-18   NR YP_980246.1 408719 g155738 i0 61.9 14.5384615384615 63 24 76.5 0 1 189 50 112 YP_980246.1 REP protein [Sida yellow mosaic Yucatan virus] diamond 3591 87.4 0.995423340961098 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Geminiviridae Begomovirus Begomovirus sidaflavayucatanense
30211827 30211827 PRJNA799842_P_NODE_20592_length_664_cov_1.360406_g19083_i0 PRJNA799842 20592 664 1.360406 9.03309584 Cressdnaviricota sp. 2748378 Viruses Viruses 149 4.26e-41   NR WAE43943.1 2748378 g19083 i0 55.7 0.591867469879518 131 57 59.2 1 659 267 71 200 WAE43943.1 MAG: capsid protein [Cressdnaviricota sp.] diamond 393 149 1 Viruses   Shotokuvirae Cressdnaviricota         Cressdnaviricota sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;