RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA799842" and tax_phylum = "Candidatus Culexarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Culexarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA799842 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32425237 32425237 PRJNA799842_P_NODE_157899_length_247_cov_0.885057_g156326_i0 PRJNA799842 157899 247 0.885057 2.18609079 Candidatus Culexarchaeum yellowstonense 2928963 Archaea Archaea 49.7 8.75e-5   NR WP_304329495.1 2928963 g156326 i0 46.2 0.473684210526316 39 21 47.4 0 132 16 6 44 WP_304329495.1 hypothetical protein [Candidatus Culexarchaeum yellowstonense] diamond 117 49.7 1 Archaea   Thermoproteati Candidatus Culexarchaeota Candidatus Culexarchaeia Candidatus Culexarchaeles Candidatus Culexarchaeaceae Candidatus Culexarchaeum Candidatus Culexarchaeum yellowstonense

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;