RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA798905" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA798905 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28538537 28538537 PRJNA798905_S_NODE_4847_length_604_cov_6.928437_g4403_i0 PRJNA798905 4847 604 6.928437 41.84775948 Polytolypa hystricis UAMH7299 1447883 Fungi Fungi 46.2 0.0384   NR PGH23900.1 1447883 g4403 i0 32.6 0.471854304635762 95 60 46.2 3 332 54 35 127 PGH23900.1 hypothetical protein AJ80_01962 [Polytolypa hystricis UAMH7299] diamond 285 46.2 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Onygenales   Polytolypa Polytolypa hystricis
32583468 32583468 PRJNA798905_S_NODE_12499_length_400_cov_5.284404_g12050_i0 PRJNA798905 12499 400 5.284404 21.137616 Fusarium sarcochroum 1208366 Fungi Fungi 79.3 3.54e-14   NR KAF4970130.1 1208366 g12050 i0 36.6 1.875 123 77 92.3 1 386 18 971 1092 KAF4970130.1 hypothetical protein FSARC_2727 [Fusarium sarcochroum] diamond 750 79.3 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium sarcochroum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;