RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA798905" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA798905 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27749217 27749217 PRJNA798905_S_NODE_3244_length_743_cov_613.671642_g2826_i0 PRJNA798905 3244 743 613.671642 4559.58030006 Bactrocera tryoni 59916 Arthropoda Arthropoda 62.4 2.23e-7   NR XP_039967484.1 59916 g2826 i0 65.9 0.177658142664872 44 15 17.8 0 372 503 1 44 XP_039967484.1 DNA ligase-like, partial [Bactrocera tryoni] diamond 132 62.4 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Tephritidae Bactrocera Bactrocera tryoni
30117034 30117034 PRJNA798905_S_NODE_40912_length_236_cov_2.993865_g40463_i0 PRJNA798905 40912 236 2.993865 7.0655214 Trichonephila clavata 2740835 Arthropoda Arthropoda 45.1 0.00443   NR GFQ94560.1 2740835 g40463 i0 46.3 0.686440677966102 54 26 66.1 2 60 215 153 205 GFQ94560.1 helitron_like_N domain-containing protein [Trichonephila clavata] diamond 162 45.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Nephilidae Trichonephila Trichonephila clavata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;