RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA798511" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA798511 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2067025 2067025 PRJNA798511_P_NODE_90262_length_250_cov_0.870056_g85996_i0 PRJNA798511 90262 250 0.870056 2.17514 Eukaryota 2759 Fungi Fungi 76.6 1.72e-14   NR KAK7745200.1 117547 g85996 i0 80 45.528 45 9 54 0 114 248 124 168 KAK7745200.1 Small subunit processome complex component [Diatrype stigma] diamond 11382 77 0.994805194805195 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Diatrypaceae Diatrype Diatrype stigma
26705502 26705502 PRJNA798511_P_NODE_48081_length_367_cov_1.176871_g43815_i0 PRJNA798511 48081 367 1.176871 4.31911657 Pneumocystis canis 2698477 Fungi Fungi 52 9.08e-5   NR KAG5440554.1 2698477 g43815 i0 35.7 0.686648501362398 84 50 66.2 3 1 243 596 678 KAG5440554.1 hypothetical protein PCK2_000379 [Pneumocystis canis] diamond 252 52 1 Eukaryota Opisthokonta Fungi Ascomycota Pneumocystomycetes Pneumocystales Pneumocystaceae Pneumocystis Pneumocystis canis
28159606 28159606 PRJNA798511_P_NODE_61225_length_314_cov_1.024896_g56959_i0 PRJNA798511 61225 314 1.024896 3.21817344 Apodospora peruviana 516989 Fungi Fungi 75.9 2.03e-13   NR KAK3318978.1 516989 g56959 i0 42 0.955414012738854 100 50 95.5 2 310 11 845 936 KAK3318978.1 hypothetical protein B0H66DRAFT_582413 [Apodospora peruviana] diamond 300 75.9 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales Lasiosphaeriaceae Apodospora Apodospora peruviana
28452762 28452762 PRJNA798511_P_NODE_33906_length_484_cov_1.481752_g29648_i0 PRJNA798511 33906 484 1.481752 7.17167968 Opisthokonta 33154 Fungi Fungi 45.8 0.0355   NR KAI3133297.1 5082 g29648 i0 60 1.38842975206612 30 12 18.6 0 394 483 1133 1162 KAI3133297.1 hypothetical protein CBS147326_5100 [Penicillium roqueforti] diamond 672 45.8 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium roqueforti
28853795 28853795 PRJNA798511_P_NODE_102208_length_241_cov_1.702381_g97942_i0 PRJNA798511 102208 241 1.702381 4.10273821 Phlyctema vagabunda 108571 Fungi Fungi 42.7 0.0357   NR KAL3423403.1 108571 g97942 i0 29.5 0.970954356846473 78 47 90.9 2 9 227 447 521 KAL3423403.1 XPG domain-containing protein [Phlyctema vagabunda] diamond 234 42.7 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Dermateaceae Phlyctema Phlyctema vagabunda
29043629 29043629 PRJNA798511_P_NODE_45548_length_381_cov_2.165584_g41283_i0 PRJNA798511 45548 381 2.165584 8.25087504 Colletotrichum gloeosporioides 23 1314770 Fungi Fungi 42 0.0341   NR KAH9240229.1 1314770 g41283 i0 42.5 0.31496062992126 40 23 31.5 0 146 27 9 48 KAH9240229.1 hypothetical protein K456DRAFT_1038704 [Colletotrichum gloeosporioides 23] diamond 120 42 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum gloeosporioides
29611484 29611484 PRJNA798511_P_NODE_82730_length_261_cov_1.228723_g78464_i0 PRJNA798511 82730 261 1.228723 3.20696703 Hypoxylon sp. CI-4A 1001833 Fungi Fungi 43.1 0.0327   NR OTB01380.1 1001833 g78464 i0 39.7 0.666666666666667 58 35 66.7 0 179 6 65 122 OTB01380.1 hypothetical protein M426DRAFT_220371 [Hypoxylon sp. CI-4A] diamond 174 43.1 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Hypoxylaceae Hypoxylon Hypoxylon sp. CI-4A
29674592 29674592 PRJNA798511_P_NODE_73130_length_282_cov_0.961722_g68864_i0 PRJNA798511 73130 282 0.961722 2.71205604 Aspergillus glaucus CBS 516.65 1160497 Fungi Fungi 45.4 0.00633   NR XP_022402039.1 1160497 g68864 i0 28.4 0.787234042553192 74 38 77.7 2 248 30 123 182 XP_022402039.1 uncharacterized protein ASPGLDRAFT_57473 [Aspergillus glaucus CBS 516.65] diamond 222 45.4 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus glaucus
30370359 30370359 PRJNA798511_P_NODE_84552_length_257_cov_2.043478_g80286_i0 PRJNA798511 84552 257 2.043478 5.25173846 Aspergillus carlsbadensis 1810906 Fungi Fungi 42 0.0167   NR KAJ0422817.1 1810906 g80286 i0 33.3 0.700389105058366 60 32 67.7 2 56 229 30 83 KAJ0422817.1 hypothetical protein BJY00DRAFT_66280 [Aspergillus carlsbadensis] diamond 180 42 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus carlsbadensis
31231869 31231869 PRJNA798511_P_NODE_46235_length_377_cov_1.963816_g41970_i0 PRJNA798511 46235 377 1.963816 7.40358632 Eurotiales 5042 Fungi Fungi 70.5 3.31e-11   NR KAJ5341398.1 5074 g41970 i0 40.9 9.82758620689655 93 49 74 2 48 326 643 729 KAJ5341398.1 hypothetical protein N7541_010522 [Penicillium brevicompactum] diamond 3705 71.2 0.990168539325843 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium brevicompactum
31571134 31571134 PRJNA798511_P_NODE_99316_length_243_cov_1.358824_g95050_i0 PRJNA798511 99316 243 1.358824 3.30194232 Colletotrichum chrysophilum 1836956 Fungi Fungi 43.5 0.0154   NR KAK1838269.1 1836956 g95050 i0 50 0.962962962962963 38 19 46.9 0 220 107 50 87 KAK1838269.1 hypothetical protein CCHR01_19103 [Colletotrichum chrysophilum] diamond 234 43.5 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum chrysophilum
32054426 32054426 PRJNA798511_P_NODE_79838_length_267_cov_1.278351_g75572_i0 PRJNA798511 79838 267 1.278351 3.41319717 Hypocreales 5125 Fungi Fungi 43.5 0.0267   NR PTD03603.1 5516 g75572 i0 43.9 3.68539325842697 41 23 46.1 0 203 81 492 532 PTD03603.1 hypothetical protein FCULG_00002613 [Fusarium culmorum] diamond 984 43.9 0.990888382687927 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium culmorum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;