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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA797655" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA797655 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27116910 27116910 PRJNA797655_S_NODE_24582_length_389_cov_3.982659_g23978_i0 PRJNA797655 24582 389 3.982659 15.49254351 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 44.7 0.0338   NR MBK5299036.1 2793154 g23978 i0 45.1 0.393316195372751 51 24 36.2 1 22 162 28 78 MBK5299036.1 glycosyltransferase family 4 protein [Vicinamibacteria bacterium] diamond 153 44.7 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
27211759 27211759 PRJNA797655_S_NODE_198622_length_179_cov_2.426471_g198017_i0 PRJNA797655 198622 179 2.426471 4.34338309 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 41.6 0.0414   NR HZT57189.1 2283092 g198017 i0 36.8 0.955307262569832 57 29 83.8 1 150 1 191 247 HZT57189.1 DUF2339 domain-containing protein [Pyrinomonadaceae bacterium] diamond 171 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28159563 28159563 PRJNA797655_S_NODE_272425_length_151_cov_4.685185_g271820_i0 PRJNA797655 272425 151 4.685185 7.07462935 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 40.8 0.0498   NR HXE81542.1 2910147 g271820 i0 37.8 0.894039735099338 45 28 89.4 0 3 137 42 86 HXE81542.1 PQQ-binding-like beta-propeller repeat protein [Vicinamibacterales bacterium] diamond 135 40.8 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
29706041 29706041 PRJNA797655_S_NODE_109470_length_237_cov_1.979381_g108865_i0 PRJNA797655 109470 237 1.979381 4.69113297 Candidatus Angelobacter sp. 2976921 Bacteria Bacteria 45.8 0.00107   NR HEX2328619.1 2976921 g108865 i0 36.7 0.759493670886076 60 34 70.9 1 209 42 28 87 HEX2328619.1 hypothetical protein [Candidatus Angelobacter sp.] diamond 180 45.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia     Candidatus Angelobacter Candidatus Angelobacter sp.
29737802 29737802 PRJNA797655_S_NODE_38930_length_340_cov_1.673401_g38325_i0 PRJNA797655 38930 340 1.673401 5.6895634 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 45.1 0.0131   NR HEX8118517.1 2283092 g38325 i0 30.8 0.917647058823529 104 54 90.9 4 326 18 77 163 HEX8118517.1 Crp/Fnr family transcriptional regulator [Pyrinomonadaceae bacterium] diamond 312 45.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30370321 30370321 PRJNA797655_S_NODE_228772_length_166_cov_2.130081_g228167_i0 PRJNA797655 228772 166 2.130081 3.53593446 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 41.2 0.0454   NR HEV3253237.1 2952895 g228167 i0 51.7 0.524096385542169 29 14 52.4 0 104 18 242 270 HEV3253237.1 sodium:solute symporter family protein [Candidatus Acidiferrales bacterium] diamond 87 41.2 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
31539379 31539379 PRJNA797655_S_NODE_220616_length_170_cov_1.133858_g220011_i0 PRJNA797655 220616 170 1.133858 1.9275586 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 41.2 0.0208   NR MEA2326987.1 2651171 g220011 i0 53.1 0.564705882352941 32 15 56.5 0 165 70 69 100 MEA2326987.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 96 41.2 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
32520278 32520278 PRJNA797655_S_NODE_186799_length_185_cov_1.690141_g186194_i0 PRJNA797655 186799 185 1.690141 3.12676085 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 41.6 0.0445   NR HKO13742.1 2052142 g186194 i0 30 0.972972972972973 60 38 90.8 1 9 176 508 567 HKO13742.1 capsule assembly Wzi family protein [Acidobacteriaceae bacterium] diamond 180 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
32835040 32835040 PRJNA797655_S_NODE_223760_length_168_cov_2.304000_g223155_i0 PRJNA797655 223760 168 2.304 3.87072 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.7 0.0137   NR MSO20143.1 1978231 g223155 i0 44.9 0.875 49 23 80.4 1 162 28 180 228 MSO20143.1 CPBP family intramembrane metalloprotease [Acidobacteriota bacterium] diamond 147 42.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;