RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA797655" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 3 ✖

bioproject 1

  • PRJNA797655 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26705481 26705481 PRJNA797655_S_NODE_96781_length_249_cov_2.218447_g96176_i0 PRJNA797655 96781 249 2.218447 5.52393303 uncultured Deinococcus sp. 158789 Bacteria Bacteria 42.7 0.0198   NR WP_295820926.1 158789 g96176 i0 33.9 0.710843373493976 59 39 71.1 0 178 2 33 91 WP_295820926.1 GNAT family N-acetyltransferase [uncultured Deinococcus sp.] diamond 177 42.7 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus uncultured Deinococcus sp.
27906496 27906496 PRJNA797655_S_NODE_41225_length_334_cov_2.962199_g40620_i0 PRJNA797655 41225 334 2.962199 9.89374466 Trueperaceae bacterium 2026798 Bacteria Bacteria 48.9 7.1e-4   NR MBA2667813.1 2026798 g40620 i0 39 0.736526946107784 82 46 71 2 316 80 424 504 MBA2667813.1 rhomboid family intramembrane serine protease [Trueperaceae bacterium] diamond 246 48.9 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
31602663 31602663 PRJNA797655_S_NODE_17776_length_427_cov_8.247396_g17182_i0 PRJNA797655 17776 427 8.247396 35.21638092 Deinococcaceae bacterium 3079796 Bacteria Bacteria 47.4 0.00561   NR MFN8510398.1 3079796 g17182 i0 32.6 0.646370023419204 92 57 61.1 2 83 343 296 387 MFN8510398.1 Na+/H+ antiporter NhaA [Deinococcaceae bacterium] diamond 276 47.4 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae   Deinococcaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;