RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA797655" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA797655 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26769031 26769031 PRJNA797655_S_NODE_101941_length_244_cov_1.910448_g101336_i0 PRJNA797655 101941 244 1.910448 4.66149312 Novymonas esmeraldas 1808958 Euglenozoa other_Eukaryota 43.5 0.0203   NR KAK7202037.1 1808958 g101336 i0 36.9 0.799180327868853 65 36 79.9 1 219 25 497 556 KAK7202037.1 hypothetical protein NESM_000272200 [Novymonas esmeraldas] diamond 195 43.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Novymonas Novymonas esmeraldas
32393483 32393483 PRJNA797655_S_NODE_157479_length_201_cov_2.386076_g156874_i0 PRJNA797655 157479 201 2.386076 4.79601276 Trypanosoma rangeli SC58 429131 Euglenozoa other_Eukaryota 42 0.032   NR ESL05026.1 429131 g156874 i0 68 0.373134328358209 25 8 37.3 0 106 180 43 67 ESL05026.1 hypothetical protein TRSC58_07379 [Trypanosoma rangeli SC58] diamond 75 42 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;