RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA797475" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA797475 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17359951 17359951 PRJNA797475_P_NODE_5174_length_441_cov_1.578804_g5076_i0 PRJNA797475 5174 441 1.578804 6.96252564 Homavirus sp. 2487769 Viruses Viruses 207 1.98e-63   NR AYV82419.1 2487769 g5076 i0 65.5 0.986394557823129 145 49 98 1 432 1 3 147 AYV82419.1 MAG: elongation factor 1-alpha-like protein [Homavirus sp.] diamond 435 207 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Homavirus sp.
30465028 30465028 PRJNA797475_P_NODE_19313_length_261_cov_1.787234_g19214_i0 PRJNA797475 19313 261 1.787234 4.66468074 Adintovirus bos4377 3115894 Viruses Viruses 63.2 1.55e-9   NR DBA50496.1 3115894 g19214 i0 46.5 0.988505747126437 86 46 98.9 0 3 260 71 156 DBA50496.1 MAG TPA_asm: Adintoc2 [Adintovirus bos4377] diamond 258 63.2 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
32425121 32425121 PRJNA797475_P_NODE_14139_length_288_cov_1.432558_g14040_i0 PRJNA797475 14139 288 1.432558 4.12576704 Homavirus sp. 2487769 Viruses Viruses 94.7 8.050000000000001e-21   NR AYV82419.1 2487769 g14040 i0 45.2 2.86458333333333 93 51 96.9 0 287 9 234 326 AYV82419.1 MAG: elongation factor 1-alpha-like protein [Homavirus sp.] diamond 825 94.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Homavirus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;