RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA796753" and tax_phylum = "Orthonectida"

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tax_superkingdom 1

tax_phylum 1

  • Orthonectida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA796753 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26673655 26673655 PRJNA796753_P_NODE_14081_length_378_cov_1.200000_g13769_i0 PRJNA796753 14081 378 1.2 4.536 Intoshia linei 1819745 Orthonectida other_Eukaryota 64.7 3.53e-9   NR OAF70046.1 1819745 g13769 i0 32.3 1.00793650793651 127 79 96.8 5 13 378 109 233 OAF70046.1 Polycystin-2 [Intoshia linei] diamond 381 64.7 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
29075136 29075136 PRJNA796753_P_NODE_15888_length_360_cov_1.073171_g15576_i0 PRJNA796753 15888 360 1.073171 3.8634156 Intoshia linei 1819745 Orthonectida other_Eukaryota 58.2 5.53e-7   NR OAF65728.1 1819745 g15576 i0 58.3 0.3 36 15 30 0 1 108 512 547 OAF65728.1 hypothetical protein A3Q56_06555 [Intoshia linei] diamond 108 58.2 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei
30370259 30370259 PRJNA796753_P_NODE_23112_length_311_cov_0.970588_g22800_i0 PRJNA796753 23112 311 0.970588 3.01852868 Intoshia linei 1819745 Orthonectida other_Eukaryota 60.8 2.61e-8   NR OAF69534.1 1819745 g22800 i0 50 0.617363344051447 64 30 61.7 1 296 105 41 102 OAF69534.1 hypothetical protein A3Q56_02640 [Intoshia linei] diamond 192 60.8 1 Eukaryota Opisthokonta Metazoa Orthonectida     Rhopaluridae Intoshia Intoshia linei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;