RNAquarium Metadata Server
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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA796753" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA796753 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27116834 27116834 PRJNA796753_P_NODE_17422_length_347_cov_1.124088_g17110_i0 PRJNA796753 17422 347 1.124088 3.90058536 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 83.2 4.98e-17   NR KAG9395588.1 201153 g17110 i0 35.1 1.92795389048991 114 72 98.6 1 5 346 29 140 KAG9395588.1 emp24/gp25L/p24 family/GOLD [Carpediemonas membranifera] diamond 669 83.2 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
27220760 27220760 PRJNA796753_P_NODE_43362_length_248_cov_0.880000_g43050_i0 PRJNA796753 43362 248 0.88 2.1824 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 47.4 9.27e-4   NR ESU39807.1 5741 g43050 i0 36.9 3.07258064516129 65 34 72.6 2 194 15 572 634 ESU39807.1 Variant-specific surface protein [Giardia intestinalis] diamond 762 47.4 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
27559211 27559211 PRJNA796753_P_NODE_3944_length_672_cov_1.542571_g3645_i0 PRJNA796753 3944 672 1.542571 10.36607712 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 72.4 1.2e-10   NR XP_067766864.1 348837 g3645 i0 29.1 0.90625 203 119 87.5 10 62 649 336 520 XP_067766864.1 Cysteine-rich membrane protein 2 [Spironucleus salmonicida] diamond 609 72.4 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
27559219 27559219 PRJNA796753_P_NODE_45684_length_247_cov_0.885057_g45372_i0 PRJNA796753 45684 247 0.885057 2.18609079 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 44.3 0.0113   NR GKT37136.1 2918883 g45372 i0 35.6 0.88663967611336 73 38 88.7 2 241 23 378 441 GKT37136.1 hypothetical protein ADUPG1_009982, partial [Aduncisulcus paluster] diamond 219 44.3 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
27559220 27559220 PRJNA796753_P_NODE_45884_length_247_cov_0.885057_g45572_i0 PRJNA796753 45884 247 0.885057 2.18609079 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 63.2 2.47e-9   NR KAG9392087.1 201153 g45572 i0 46.7 0.728744939271255 60 32 72.9 0 180 1 62 121 KAG9392087.1 RNA (C5-cytosine) methyltransferase [Carpediemonas membranifera] diamond 180 63.2 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
27726812 27726812 PRJNA796753_P_NODE_19464_length_333_cov_1.184615_g19152_i0 PRJNA796753 19464 333 1.184615 3.94476795 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 47.8 0.00182   NR EFO60851.1 658858 g19152 i0 41.5 1.77477477477477 65 37 58.6 1 23 217 485 548 EFO60851.1 High cysteine membrane protein Group 2 [Giardia lamblia P15] diamond 591 47.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
27843376 27843376 PRJNA796753_P_NODE_11484_length_412_cov_0.908555_g11172_i0 PRJNA796753 11484 412 0.908555 3.7432466 Giardia intestinalis 5741 Fornicata other_Eukaryota 53.5 3.91e-5   NR XP_001707611.1 5741 g11172 i0 33.3 1.86407766990291 120 63 75 3 312 4 102 221 XP_001707611.1 High cysteine membrane protein Group 5 [Giardia intestinalis] diamond 768 53.5 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
29485130 29485130 PRJNA796753_P_NODE_19990_length_329_cov_1.707031_g19678_i0 PRJNA796753 19990 329 1.707031 5.61613199 Giardia muris 5742 Fornicata other_Eukaryota 53.9 6.93e-6   NR TNJ27030.1 5742 g19678 i0 36.1 1.51367781155015 83 52 75.7 1 268 20 136 217 TNJ27030.1 Translation elongation factor 1-beta [Giardia muris] diamond 498 53.9 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
30053694 30053694 PRJNA796753_P_NODE_251_length_1886_cov_23.280199_g209_i0 PRJNA796753 251 1886 23.280199 439.06455314 Giardia intestinalis assemblage B 1394984 Fornicata other_Eukaryota 48.1 0.0426   NR KWX14910.1 1394984 g209 i0 30.1 0.295864262990456 186 101 27.8 9 878 354 2 169 KWX14910.1 Variant-specific surface protein [Giardia intestinalis assemblage B] diamond 558 48.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
30622428 30622428 PRJNA796753_P_NODE_30113_length_280_cov_1.048309_g29801_i0 PRJNA796753 30113 280 1.048309 2.9352652 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 52 3.27e-5   NR XP_067766927.1 348837 g29801 i0 33.3 7.5 81 48 86.8 2 268 26 306 380 XP_067766927.1 Cysteine-rich membrane protein 2 [Spironucleus salmonicida] diamond 2100 52 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
31105483 31105483 PRJNA796753_P_NODE_12015_length_404_cov_0.930514_g11703_i0 PRJNA796753 12015 404 0.930514 3.75927656 Giardia 5740 Fornicata other_Eukaryota 47.4 0.00497   NR ESU40575.1 5741 g11703 i0 44.2 1.32178217821782 43 24 31.9 0 39 167 296 338 ESU40575.1 Variant-specific surface protein [Giardia intestinalis] diamond 534 47.4 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
32551894 32551894 PRJNA796753_P_NODE_33759_length_268_cov_1.184615_g33447_i0 PRJNA796753 33759 268 1.184615 3.1747682 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 66.2 2.78e-10   NR GKT35787.1 2918883 g33447 i0 37.2 0.962686567164179 86 54 96.3 0 267 10 195 280 GKT35787.1 hypothetical protein ADUPG1_008874 [Aduncisulcus paluster] diamond 258 66.2 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
32645820 32645820 PRJNA796753_P_NODE_38720_length_251_cov_1.297753_g38408_i0 PRJNA796753 38720 251 1.297753 3.25736003 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 61.6 1.5e-9   NR GKT34779.1 2918883 g38408 i0 49 0.609561752988048 51 26 61 0 250 98 98 148 GKT34779.1 hypothetical protein ADUPG1_008070 [Aduncisulcus paluster] diamond 153 61.6 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;