contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA796753" and tax_kingdom = "Thermotogati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5884208 | 5884208 | PRJNA796753_P_NODE_3065_length_757_cov_1.261696_g2788_i0 | PRJNA796753 | 3065 | 757 | 1.261696 | 9.55103872 | FCB group | 1783270 | Bacteria | Bacteria | 349 | 8.939999999999997e-119 | NR | MCL5965184.1 | 47478 | g2788 | i0 | 75.2 | 29.8969616908851 | 230 | 57 | 91.1 | 0 | 35 | 724 | 27 | 256 | MCL5965184.1 glucose 1-dehydrogenase [Deinococcus sp.] | diamond | 22632 | 351 | 0.994301994301994 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 17359070 | 17359070 | PRJNA796753_P_NODE_3374_length_724_cov_1.549923_g3087_i0 | PRJNA796753 | 3374 | 724 | 1.549923 | 11.22144252 | FCB group | 1783270 | Bacteria | Bacteria | 284 | 1.0999999999999999e-89 | NR | WP_110886906.1 | 309889 | g3087 | i0 | 62.8 | 15.7375690607735 | 242 | 83 | 99.9 | 3 | 1 | 723 | 115 | 350 | WP_110886906.1 S8 family peptidase [Deinococcus yavapaiensis] | diamond | 11394 | 286 | 0.993006993006993 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus yavapaiensis | ||
| 26778279 | 26778279 | PRJNA796753_P_NODE_29321_length_282_cov_1.473684_g29009_i0 | PRJNA796753 | 29321 | 282 | 1.473684 | 4.15578888 | Bacteria | 2 | Bacteria | Bacteria | 198 | 4.9699999999999994e-57 | NR | 1TAQ_A | 271 | g29009 | i0 | 100 | 3.95744680851064 | 93 | 0 | 98.9 | 0 | 2 | 280 | 122 | 214 | 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] | diamond | 1116 | 198 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus | ||
| 27125781 | 27125781 | PRJNA796753_P_NODE_16342_length_356_cov_1.088339_g16030_i0 | PRJNA796753 | 16342 | 356 | 1.088339 | 3.87448684 | Bacteria | 2 | Bacteria | Bacteria | 149 | 6.0999999999999996e-43 | NR | WP_380061380.1 | 309883 | g16030 | i0 | 58.5 | 6.96067415730337 | 118 | 49 | 99.4 | 0 | 354 | 1 | 58 | 175 | WP_380061380.1 hypothetical protein [Deinococcus hohokamensis] | diamond | 2478 | 150 | 0.993333333333333 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus hohokamensis | ||
| 32749656 | 32749656 | PRJNA796753_P_NODE_23840_length_307_cov_0.978632_g23528_i0 | PRJNA796753 | 23840 | 307 | 0.978632 | 3.00440024 | Thermotogae | 188708 | Bacteria | Bacteria | 109 | 3.29e-25 | NR | WP_300980648.1 | 2053577 | g23528 | i0 | 52.6 | 9.35179153094463 | 95 | 44 | 91.9 | 1 | 5 | 286 | 613 | 707 | WP_300980648.1 formylglycine-generating enzyme family protein [Mesotoga sp.] | diamond | 2871 | 109 | 1 | Bacteria | Thermotogati | Thermotogota | Thermotogae | Kosmotogales | Kosmotogaceae | Mesotoga | Mesotoga sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;