RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA796753" and tax_clade = "Pithoviruses"

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tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 5 ✖

bioproject 1

  • PRJNA796753 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27085533 27085533 PRJNA796753_P_NODE_24162_length_305_cov_1.297414_g23850_i0 PRJNA796753 24162 305 1.297414 3.9571127 Pithovirus LCPAC1 2506587 Viruses Viruses 50.4 1.5e-4   NR QBK90293.1 2506587 g23850 i0 33.3 0.826229508196721 84 51 80.7 3 49 294 21 101 QBK90293.1 MAG: hypothetical protein LCPAC102_02060 [Pithovirus LCPAC102] diamond 252 50.4 1 Viruses Pithoviruses             Pithovirus LCPAC102
28064545 28064545 PRJNA796753_P_NODE_27225_length_289_cov_1.425926_g26913_i0 PRJNA796753 27225 289 1.425926 4.12092614 Pithovirus LCPAC1 2506587 Viruses Viruses 52 3.42e-5   NR QBK90128.1 2506587 g26913 i0 31.6 0.986159169550173 95 61 94.5 1 10 282 190 284 QBK90128.1 MAG: regulator of chromosome condensation protein [Pithovirus LCPAC102] diamond 285 52 1 Viruses Pithoviruses             Pithovirus LCPAC102
29232989 29232989 PRJNA796753_P_NODE_7929_length_485_cov_4.975728_g7618_i0 PRJNA796753 7929 485 4.975728 24.1322808 Pithovirus LCPAC3 2506593 Viruses Viruses 75.1 9.3e-14   NR QBK91478.1 2506593 g7618 i0 35.9 0.896907216494845 145 85 88.5 3 14 442 3 141 QBK91478.1 MAG: hypothetical protein LCPAC302_00980 [Pithovirus LCPAC302] diamond 435 75.1 1 Viruses Pithoviruses             Pithovirus LCPAC302
30527755 30527755 PRJNA796753_P_NODE_45613_length_247_cov_0.885057_g45301_i0 PRJNA796753 45613 247 0.885057 2.18609079 Pithovirus LCPAC1 2506587 Viruses Viruses 56.2 6.95e-7   NR QBK90293.1 2506587 g45301 i0 37.3 0.716599190283401 59 37 71.7 0 235 59 333 391 QBK90293.1 MAG: hypothetical protein LCPAC102_02060 [Pithovirus LCPAC102] diamond 177 56.2 1 Viruses Pithoviruses             Pithovirus LCPAC102
32520250 32520250 PRJNA796753_P_NODE_48579_length_245_cov_0.895349_g48267_i0 PRJNA796753 48579 245 0.895349 2.19360505 Pithovirus LCPAC1 2506587 Viruses Viruses 60.5 2.13e-8   NR QBK90167.1 2506587 g48267 i0 44.4 0.881632653061225 72 38 85.7 1 22 231 346 417 QBK90167.1 MAG: F-box and regulator of chromosome condensation repeat protein [Pithovirus LCPAC102] diamond 216 60.5 1 Viruses Pithoviruses             Pithovirus LCPAC102

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;