RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA796639" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA796639 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
780507 780507 PRJNA796639_P_NODE_561_length_749_cov_1.849112_g447_i0 PRJNA796639 561 749 1.849112 13.84984888 Yarrowia sp. B 1884667 Fungi Fungi 454 1.9599999999999994e-159   NR KAG5362693.1 2768839 g447 i0 99.6 0.957276368491322 239 1 95.7 0 718 2 21 259 KAG5362693.1 Mitochondrial outer membrane protein porin [Yarrowia sp. B02] diamond 717 454 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia sp. B02
26642256 26642256 PRJNA796639_P_NODE_3121_length_317_cov_2.524590_g2996_i0 PRJNA796639 3121 317 2.52459 8.0029503 Yarrowia lipolytica 4952 Fungi Fungi 159 1.39e-47   NR KAB8282603.1 4952 g2996 i0 100 1.72239747634069 91 0 86.1 0 274 2 1 91 KAB8282603.1 hypothetical protein BKA91DRAFT_168416 [Yarrowia lipolytica] diamond 546 159 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia lipolytica
26927269 26927269 PRJNA796639_P_NODE_1742_length_424_cov_1.259259_g1617_i0 PRJNA796639 1742 424 1.259259 5.33925816 Trichoderma reesei RUT C-3 51453 Fungi Fungi 142 1.31e-41   NR ETS03557.1 1344414 g1617 i0 100 0.488207547169811 69 0 48.8 0 212 6 1 69 ETS03557.1 hypothetical protein M419DRAFT_118405, partial [Trichoderma reesei RUT C-30] diamond 207 142 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma reesei
27852594 27852594 PRJNA796639_P_NODE_1184_length_518_cov_1.505618_g1060_i0 PRJNA796639 1184 518 1.505618 7.79910124 Yarrowia 4951 Fungi Fungi 289 1.72e-90   NR RDW35055.1 4952 g1060 i0 100 1.96911196911197 170 0 98.5 0 8 517 556 725 RDW35055.1 major facilitator superfamily domain-containing protein [Yarrowia lipolytica] diamond 1020 289 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia lipolytica
31065150 31065150 PRJNA796639_P_NODE_7415_length_243_cov_0.905882_g7290_i0 PRJNA796639 7415 243 0.905882 2.20129326 Geotrichum candidum 1173061 Fungi Fungi 115 1.68e-31   NR CDO53334.1 1173061 g7290 i0 72.2 1.96296296296296 79 22 97.5 0 238 2 12 90 CDO53334.1 NIDM subunit of mitochondrial NADH:ubiquinone oxidoreductase (complex I), putative [Geotrichum candidum] diamond 477 115 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales Dipodascaceae Geotrichum Geotrichum candidum
32267014 32267014 PRJNA796639_P_NODE_5338_length_255_cov_1.692308_g5213_i0 PRJNA796639 5338 255 1.692308 4.3153854 Yarrowia lipolytica 4952 Fungi Fungi 107 1.43e-28   NR KAB8281429.1 4952 g5213 i0 100 0.611764705882353 52 0 61.2 0 36 191 1 52 KAB8281429.1 metallothionein family 11-domain-containing protein [Yarrowia lipolytica] diamond 156 107 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia lipolytica
32362011 32362011 PRJNA796639_P_NODE_6939_length_245_cov_0.895349_g6814_i0 PRJNA796639 6939 245 0.895349 2.19360505 Yarrowia lipolytica 4952 Fungi Fungi 82.4 5.35e-18   NR RMI94261.1 4952 g6814 i0 97.7 0.52653061224489806 43 1 52.7 0 40 168 1 43 RMI94261.1 hypothetical protein BD777DRAFT_163932, partial [Yarrowia lipolytica] diamond 129 82.4 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia lipolytica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;