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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA795663" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA795663 · 29 ✖

analysis 1

  • diamond · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
779424 779424 PRJNA795663_S_NODE_3761_length_298_cov_1.383142_g3656_i0 PRJNA795663 3761 298 1.383142 4.12176316 Pedobacter cryoconitis 188932 Bacteria Bacteria 97.4 4.38e-21   NR WP_184661765.1 188932 g3656 i0 53.1 1.97315436241611 98 46 98.7 0 2 295 488 585 WP_184661765.1 MASE3 domain-containing protein [Pedobacter cryoconitis] diamond 588 97.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter cryoconitis
21181870 21181870 PRJNA795663_S_NODE_17477_length_155_cov_0.983051_g17372_i0 PRJNA795663 17477 155 0.983051 1.52372905 Pedobacter 84567 Bacteria Bacteria 87 2.71e-18   NR WP_222536601.1 84567 g17372 i0 94.1 2.96129032258065 51 3 98.7 0 2 154 156 206 WP_222536601.1 MULTISPECIES: sodium:solute symporter family transporter [Pedobacter] diamond 459 87.8 0.990888382687927 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter  
26673626 26673626 PRJNA795663_S_NODE_9301_length_199_cov_1.222222_g9196_i0 PRJNA795663 9301 199 1.222222 2.43222178 Porphyromonadaceae bacterium KA 2049046 Bacteria Bacteria 40 0.0389   NR KXB75036.1 1588749 g9196 i0 60.7 0.422110552763819 28 11 42.2 0 119 36 32 59 KXB75036.1 hypothetical protein HMPREF3184_00950 [Porphyromonadaceae bacterium KA00676] diamond 84 40 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Porphyromonadaceae   Porphyromonadaceae bacterium KA00676
26832333 26832333 PRJNA795663_S_NODE_5021_length_260_cov_2.291480_g4916_i0 PRJNA795663 5021 260 2.29148 5.957848 Sphingobacterium spiritivorum 258 Bacteria Bacteria 155 1.14e-41   NR WP_115169532.1 258 g4916 i0 94 0.969230769230769 84 4 96.9 1 3 254 4696 4778 WP_115169532.1 DUF7507 domain-containing protein [Sphingobacterium spiritivorum] diamond 252 155 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium spiritivorum
27179983 27179983 PRJNA795663_S_NODE_15982_length_160_cov_1.520325_g15877_i0 PRJNA795663 15982 160 1.520325 2.43252 Hymenobacter wooponensis 1525360 Bacteria Bacteria 92 2.09e-20   NR WP_135529310.1 1525360 g15877 i0 89.8 0.91875 49 5 91.9 0 2 148 304 352 WP_135529310.1 succinylglutamate desuccinylase/aspartoacylase family protein [Hymenobacter wooponensis] diamond 147 92 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Hymenobacter Hymenobacter wooponensis
27370192 27370192 PRJNA795663_S_NODE_11763_length_181_cov_1.194444_g11658_i0 PRJNA795663 11763 181 1.194444 2.16194364 Pedobacter sp. MR2 1411316 Bacteria Bacteria 53.9 1.88e-6   NR WP_265832287.1 2994466 g11658 i0 100 0.464088397790055 28 0 46.4 0 98 181 1 28 WP_265832287.1 SusC/RagA family TonB-linked outer membrane protein [Pedobacter sp. MR2016-24] diamond 84 53.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter sp. MR2016-24
27370193 27370193 PRJNA795663_S_NODE_18423_length_152_cov_1.008696_g18318_i0 PRJNA795663 18423 152 1.008696 1.53321792 Pedobacter sp. 1411316 Bacteria Bacteria 96.7 9.65e-22   NR MDB5021528.1 1411316 g18318 i0 90 0.986842105263158 50 5 98.7 0 1 150 313 362 MDB5021528.1 RagB/SusD protein [Pedobacter sp.] diamond 150 96.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter sp.
27600272 27600272 PRJNA795663_S_NODE_13884_length_169_cov_1.628788_g13779_i0 PRJNA795663 13884 169 1.628788 2.75265172 Pedobacter 84567 Bacteria Bacteria 98.6 1.02e-24   NR WP_169741374.1 34086 g13779 i0 90.9 1.95266272189349 55 5 97.6 0 5 169 35 89 WP_169741374.1 TolC family protein, partial [Pedobacter antarcticus] diamond 330 98.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter antarcticus
27685967 27685967 PRJNA795663_S_NODE_4004_length_289_cov_2.333333_g3899_i0 PRJNA795663 4004 289 2.333333 6.74333237 Hymenobacter gelipurpurascens 89968 Bacteria Bacteria 75.5 2.25e-15   NR WP_141106519.1 89968 g3899 i0 82.2 0.467128027681661 45 8 46.7 0 155 289 1 45 WP_141106519.1 hypothetical protein [Hymenobacter gelipurpurascens] diamond 135 75.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Hymenobacter Hymenobacter gelipurpurascens
27780495 27780495 PRJNA795663_S_NODE_1024_length_531_cov_2.848178_g928_i0 PRJNA795663 1024 531 2.848178 15.12382518 Pedobacter chitinilyticus 2233776 Bacteria Bacteria 322 3.48e-102   NR WP_113647024.1 2233776 g928 i0 99.4 0.949152542372881 168 1 94.9 0 517 14 275 442 WP_113647024.1 gliding motility-associated C-terminal domain-containing protein [Pedobacter chitinilyticus] diamond 504 322 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter chitinilyticus
28001566 28001566 PRJNA795663_S_NODE_11445_length_183_cov_1.315068_g11340_i0 PRJNA795663 11445 183 1.315068 2.40657444 Sphingobacterium sp. UBA5789 1947503 Bacteria Bacteria 74.7 8.78e-14   NR WP_293916519.1 1947503 g11340 i0 60 1.9672131147541 60 24 98.4 0 182 3 347 406 WP_293916519.1 hypothetical protein [Sphingobacterium sp. UBA5789] diamond 360 74.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium sp. UBA5789
28452731 28452731 PRJNA795663_S_NODE_1066_length_522_cov_13.391753_g968_i0 PRJNA795663 1066 522 13.391753 69.90495066 FCB group 1783270 Bacteria Bacteria 113 1.1199999999999999e-28   NR WP_050229787.1 821 g968 i0 100 1.7816091954023 77 0 44.3 0 298 68 1 77 WP_050229787.1 hypothetical protein [Phocaeicola vulgatus] diamond 930 114 0.991228070175439 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Phocaeicola Phocaeicola vulgatus
28696182 28696182 PRJNA795663_S_NODE_7047_length_224_cov_1.967914_g6942_i0 PRJNA795663 7047 224 1.967914 4.40812736 Hymenobacter gelipurpurascens 89968 Bacteria Bacteria 82.4 3.06e-17   NR WP_088843432.1 89968 g6942 i0 77.6 0.776785714285714 58 12 76.3 1 53 223 1 58 WP_088843432.1 OmpH family outer membrane protein [Hymenobacter gelipurpurascens] diamond 174 82.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Hymenobacteraceae Hymenobacter Hymenobacter gelipurpurascens
28821988 28821988 PRJNA795663_S_NODE_11208_length_184_cov_2.319728_g11103_i0 PRJNA795663 11208 184 2.319728 4.26829952 Sphingobacteriia bacterium 2035813 Bacteria Bacteria 118 4.69e-29   NR MBN8837482.1 2035813 g11103 i0 86.9 1.98913043478261 61 8 99.5 0 2 184 62 122 MBN8837482.1 penicillin acylase family protein [Sphingobacteriia bacterium] diamond 366 118 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia       Sphingobacteriia bacterium
28885345 28885345 PRJNA795663_S_NODE_16588_length_158_cov_1.123967_g16483_i0 PRJNA795663 16588 158 1.123967 1.77586786 Flavobacterium lindanitolerans 428988 Bacteria Bacteria 52.8 3.39e-6   NR WP_308842318.1 428988 g16483 i0 76.7 0.569620253164557 30 7 57 0 67 156 1 30 WP_308842318.1 fibronectin type III domain-containing protein [Flavobacterium lindanitolerans] diamond 90 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium lindanitolerans
29210498 29210498 PRJNA795663_S_NODE_11009_length_186_cov_1.040268_g10904_i0 PRJNA795663 11009 186 1.040268 1.93489848 Cytophagales 768507 Bacteria Bacteria 97.1 1.18e-21   NR WP_381508363.1 2048557 g10904 i0 72.1 2.95161290322581 61 17 98.4 0 2 184 373 433 WP_381508363.1 PAS domain-containing sensor histidine kinase [Spirosoma flavum] diamond 549 97.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae Spirosoma Spirosoma flavum
29864241 29864241 PRJNA795663_S_NODE_9311_length_199_cov_1.129630_g9206_i0 PRJNA795663 9311 199 1.12963 2.2479637 Flavobacterium microcysteis 2596891 Bacteria Bacteria 127 4.639999999999999e-32   NR WP_139998303.1 2596891 g9206 i0 93.9 0.994974874371859 66 4 99.5 0 198 1 474 539 WP_139998303.1 T9SS type A sorting domain-containing protein [Flavobacterium microcysteis] diamond 198 127 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium microcysteis
29990692 29990692 PRJNA795663_S_NODE_6791_length_228_cov_1.376963_g6686_i0 PRJNA795663 6791 228 1.376963 3.13947564 Taibaiella chishuiensis 1434707 Bacteria Bacteria 137 1.86e-37   NR WP_106522427.1 1434707 g6686 i0 100 0.934210526315789 71 0 93.4 0 16 228 1 71 WP_106522427.1 DUF4157 domain-containing protein [Taibaiella chishuiensis] diamond 213 137 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Taibaiella Taibaiella chishuiensis
30410860 30410860 PRJNA795663_S_NODE_13293_length_172_cov_1.725926_g13188_i0 PRJNA795663 13293 172 1.725926 2.96859272 Bacteroidota 976 Bacteria Bacteria 60.1 1.09e-8   NR WP_090169938.1 478744 g13188 i0 58.3 6.59302325581395 48 20 83.7 0 17 160 215 262 WP_090169938.1 NAD(P)/FAD-dependent oxidoreductase [Neolewinella agarilytica] diamond 1134 60.5 0.993388429752066 Bacteria FCB group Pseudomonadati Bacteroidota Saprospiria Saprospirales Lewinellaceae Neolewinella Neolewinella agarilytica
30590857 30590857 PRJNA795663_S_NODE_18433_length_152_cov_1.008696_g18328_i0 PRJNA795663 18433 152 1.008696 1.53321792 Bacteroidaceae bacterium 2212467 Bacteria Bacteria 105 6.630000000000001e-27   NR MBO6256099.1 2212467 g18328 i0 98 0.986842105263158 50 1 98.7 0 150 1 63 112 MBO6256099.1 CHAP domain-containing protein [Bacteroidaceae bacterium] diamond 150 105 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae   Bacteroidaceae bacterium
31127684 31127684 PRJNA795663_S_NODE_12295_length_178_cov_1.099291_g12190_i0 PRJNA795663 12295 178 1.099291 1.95673798 Mangrovimonas sp. 2020865 Bacteria Bacteria 80.9 3.94e-16   NR MCB0423081.1 2020865 g12190 i0 68.6 0.859550561797753 51 16 86 0 170 18 81 131 MCB0423081.1 hypothetical protein [Mangrovimonas sp.] diamond 153 80.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Mangrovimonas Mangrovimonas sp.
31570970 31570970 PRJNA795663_S_NODE_7956_length_213_cov_1.102273_g7851_i0 PRJNA795663 7956 213 1.102273 2.34784149 Pedobacter hartonius 425514 Bacteria Bacteria 124 2e-31   NR WP_090557934.1 425514 g7851 i0 95.7 0.985915492957746 70 3 98.6 0 3 212 321 390 WP_090557934.1 sensor histidine kinase [Pedobacter hartonius] diamond 210 124 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter hartonius
31602577 31602577 PRJNA795663_S_NODE_10716_length_188_cov_1.000000_g10611_i0 PRJNA795663 10716 188 1 1.88 Pedobacter sp. ASV28 2795123 Bacteria Bacteria 127 4.19e-33   NR WP_233164629.1 2795123 g10611 i0 95.2 0.98936170212766 62 3 98.9 0 187 2 337 398 WP_233164629.1 exonuclease domain-containing protein [Pedobacter sp. ASV28] diamond 186 127 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter sp. ASV28
31706463 31706463 PRJNA795663_S_NODE_15357_length_162_cov_2.408000_g15252_i0 PRJNA795663 15357 162 2.408 3.90096 Flavobacterium 237 Bacteria Bacteria 108 9.48e-26   NR WP_379790428.1 1442595 g15252 i0 98.1 4 54 1 100 0 162 1 331 384 WP_379790428.1 potassium-transporting ATPase subunit KdpA [Flavobacterium qiangtangense] diamond 648 108 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium qiangtangense
31706464 31706464 PRJNA795663_S_NODE_6997_length_225_cov_1.627660_g6892_i0 PRJNA795663 6997 225 1.62766 3.662235 Chryseolinea 1433993 Bacteria Bacteria 129 3.2100000000000004e-33   NR HZB14083.1 2059303 g6892 i0 77.8 3.90666666666667 72 16 96 0 224 9 173 244 HZB14083.1 thioredoxin-like domain-containing protein [Chryseolinea sp.] diamond 879 130 0.992307692307692 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Fulvivirgaceae Chryseolinea Chryseolinea sp.
31791982 31791982 PRJNA795663_S_NODE_5337_length_253_cov_1.444444_g5232_i0 PRJNA795663 5337 253 1.444444 3.65444332 Flavobacterium lindanitolerans 428988 Bacteria Bacteria 81.3 9.87e-16   NR MBC8644865.1 428988 g5232 i0 100 1.38735177865613 39 0 46.2 0 3 119 403 441 MBC8644865.1 hypothetical protein [Flavobacterium lindanitolerans] diamond 351 81.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium lindanitolerans
32172076 32172076 PRJNA795663_S_NODE_9398_length_198_cov_1.434783_g9293_i0 PRJNA795663 9398 198 1.434783 2.84087034 Taibaiella chishuiensis 1434707 Bacteria Bacteria 121 2.25e-30   NR WP_219905951.1 1434707 g9293 i0 92.3 0.984848484848485 65 5 98.5 0 196 2 443 507 WP_219905951.1 DUF4157 domain-containing protein [Taibaiella chishuiensis] diamond 195 121 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Taibaiella Taibaiella chishuiensis
32834936 32834936 PRJNA795663_S_NODE_11280_length_184_cov_1.312925_g11175_i0 PRJNA795663 11280 184 1.312925 2.415782 Pedobacter 84567 Bacteria Bacteria 105 6.9899999999999995e-25   NR WP_083401144.1 84567 g11175 i0 81.7 1.94021739130435 60 11 97.8 0 182 3 233 292 WP_083401144.1 MULTISPECIES: TolC family protein [Pedobacter] diamond 357 105 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter  
32834938 32834938 PRJNA795663_S_NODE_7480_length_218_cov_2.491713_g7375_i0 PRJNA795663 7480 218 2.491713 5.43193434 Sphingobacterium spiritivorum 258 Bacteria Bacteria 142 2.4099999999999997e-37   NR WP_115169532.1 258 g7375 i0 100 0.990825688073395 72 0 99.1 0 1 216 4055 4126 WP_115169532.1 DUF7507 domain-containing protein [Sphingobacterium spiritivorum] diamond 216 142 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium spiritivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;