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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA793147" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 23 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA793147 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4606213 4606213 PRJNA793147_P_NODE_39324_length_268_cov_1.904523_g39058_i0 PRJNA793147 39324 268 1.904523 5.10412164 Flavobacterium sp. MFBS3-15 2989816 Bacteria Bacteria 161 1.7699999999999996e-47   NR WP_265174263.1 2989816 g39058 i0 90.6 0.951492537313433 85 8 95.1 0 2 256 160 244 WP_265174263.1 lysophospholipid acyltransferase family protein [Flavobacterium sp. MFBS3-15] diamond 255 161 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. MFBS3-15
22454669 22454669 PRJNA793147_P_NODE_13418_length_467_cov_1.447236_g13152_i0 PRJNA793147 13418 467 1.447236 6.75859212 Chitinophaga 79328 Bacteria Bacteria 144 6.04e-40   NR PSL48164.1 536980 g13152 i0 58.2 5.4603854389721604 122 50 78.4 1 373 8 62 182 PSL48164.1 peptide-methionine (S)-S-oxide reductase [Chitinophaga niastensis] diamond 2550 145 0.993103448275862 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Chitinophaga Chitinophaga niastensis
26990265 26990265 PRJNA793147_P_NODE_52842_length_233_cov_1.756098_g52576_i0 PRJNA793147 52842 233 1.756098 4.09170834 Fibrella sp. WM1 3242485 Bacteria Bacteria 89 1.74e-18   NR WP_370701424.1 3242485 g52576 i0 50.6 1.01716738197425 79 37 99.1 1 231 1 308 386 WP_370701424.1 hypothetical protein [Fibrella sp. WM1] diamond 237 89 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Spirosomataceae Fibrella Fibrella musci
27370160 27370160 PRJNA793147_P_NODE_1763_length_1443_cov_8.368268_g1658_i0 PRJNA793147 1763 1443 8.368268 120.75410724 Emticicia sp. 17c 3127704 Bacteria Bacteria 417 2.75e-134   NR WP_337045214.1 3127704 g1658 i0 59.1 3.61746361746362 350 135 71.5 4 64 1095 32 379 WP_337045214.1 hypothetical protein [Emticicia sp. 17c] diamond 5220 417 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Leadbetterellaceae Emticicia Emticicia sp. 17c
28033092 28033092 PRJNA793147_P_NODE_6185_length_724_cov_2.621374_g5936_i0 PRJNA793147 6185 724 2.621374 18.97874776 Chryseobacterium gambrini 373672 Bacteria Bacteria 57.8 1.38e-5   NR WP_084196507.1 373672 g5936 i0 36.5 0.658839779005525 159 92 63.4 5 667 209 274 429 WP_084196507.1 endonuclease [Chryseobacterium gambrini] diamond 477 57.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium gambrini
28042173 28042173 PRJNA793147_P_NODE_60765_length_227_cov_0.911392_g60499_i0 PRJNA793147 60765 227 0.911392 2.06885984 FCB group 1783270 Bacteria Bacteria 55.5 9.21e-7   NR MBT5289878.1 239 g60499 i0 77.4 13.7973568281938 31 7 41 0 93 1 2 32 MBT5289878.1 UDP-glucose 4-epimerase GalE [Flavobacterium sp.] diamond 3132 55.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp.
28253896 28253896 PRJNA793147_P_NODE_40166_length_266_cov_1.096447_g39900_i0 PRJNA793147 40166 266 1.096447 2.91654902 Elizabethkingia miricola 172045 Bacteria Bacteria 180 2.47e-52   NR WP_249489705.1 172045 g39900 i0 100 0.992481203007519 88 0 99.2 0 1 264 146 233 WP_249489705.1 SGNH/GDSL hydrolase family protein [Elizabethkingia miricola] diamond 264 180 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Elizabethkingia Elizabethkingia miricola
28569626 28569626 PRJNA793147_P_NODE_10087_length_547_cov_109.619247_g9825_i0 PRJNA793147 10087 547 109.619247 599.61728109 Flavobacteriales bacterium 2021391 Bacteria Bacteria 54.3 6.5e-5   NR PIE50853.1 2021391 g9825 i0 38.7 0.926873857404022 75 42 38.9 1 361 149 293 367 PIE50853.1 MAG: endonuclease I [Flavobacteriales bacterium] diamond 507 54.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales     Flavobacteriales bacterium
28601358 28601358 PRJNA793147_P_NODE_44947_length_251_cov_1.582418_g44681_i0 PRJNA793147 44947 251 1.582418 3.97186918 Emticicia sp. 17c 3127704 Bacteria Bacteria 99.4 5.01e-22   NR WP_337045214.1 3127704 g44681 i0 57.7 2.54581673306773 71 30 84.9 0 215 3 27 97 WP_337045214.1 hypothetical protein [Emticicia sp. 17c] diamond 639 99.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Leadbetterellaceae Emticicia Emticicia sp. 17c
28664481 28664481 PRJNA793147_P_NODE_53767_length_233_cov_0.878049_g53501_i0 PRJNA793147 53767 233 0.878049 2.04585417 Bacteroidales bacterium 2030927 Bacteria Bacteria 95.9 7.209999999999999e-24   NR MBE6233119.1 2030927 g53501 i0 97.8 0.579399141630901 45 1 57.9 0 135 1 1 45 MBE6233119.1 membrane protein insertion efficiency factor YidD [Bacteroidales bacterium] diamond 135 95.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
28736745 28736745 PRJNA793147_P_NODE_42447_length_259_cov_1.136842_g42181_i0 PRJNA793147 42447 259 1.136842 2.94442078 FCB group 1783270 Bacteria Bacteria 63.9 5.66e-10   NR MBP3440266.1 1929085 g42181 i0 49.2 5.06177606177606 61 31 70.7 0 184 2 5 65 MBP3440266.1 uracil-DNA glycosylase [Tidjanibacter sp.] diamond 1311 63.9 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Tidjanibacter Tidjanibacter sp.
28916775 28916775 PRJNA793147_P_NODE_37688_length_274_cov_1.243902_g37422_i0 PRJNA793147 37688 274 1.243902 3.40829148 Bacteroidetes bacterium GWF2_41_31 1797348 Bacteria Bacteria 54.7 3.34e-6   NR OFY51433.1 1797348 g37422 i0 49.1 1.04014598540146 55 28 60.2 0 14 178 245 299 OFY51433.1 MAG: hypothetical protein A2W85_09850 [Bacteroidetes bacterium GWF2_41_31] diamond 285 54.7 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidetes bacterium GWF2_41_31
30496265 30496265 PRJNA793147_P_NODE_59313_length_228_cov_0.905660_g59047_i0 PRJNA793147 59313 228 0.90566 2.0649048 Elizabethkingia 308865 Bacteria Bacteria 123 3.4e-32   NR WP_059156542.1 308865 g59047 i0 100 0.776315789473684 59 0 77.6 0 226 50 250 308 WP_059156542.1 MULTISPECIES: glycosyltransferase [Elizabethkingia] diamond 177 123 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Elizabethkingia  
30590843 30590843 PRJNA793147_P_NODE_8153_length_618_cov_1.497268_g7895_i0 PRJNA793147 8153 618 1.497268 9.25311624 Thermonemataceae bacterium 2952977 Bacteria Bacteria 50.8 0.00162   NR MDX1904699.1 2952977 g7895 i0 26 0.820388349514563 169 110 80.1 7 570 76 409 566 MDX1904699.1 M60 family metallopeptidase [Thermonemataceae bacterium] diamond 507 50.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Thermonemataceae   Thermonemataceae bacterium
30780473 30780473 PRJNA793147_P_NODE_54014_length_232_cov_1.766871_g53748_i0 PRJNA793147 54014 232 1.766871 4.09914072 Sediminibacterium sp. 1917865 Bacteria Bacteria 150 5.739999999999999e-40   NR MBR2648733.1 1917865 g53748 i0 100 1.96551724137931 76 0 98.3 0 3 230 92 167 MBR2648733.1 hypothetical protein [Sediminibacterium sp.] diamond 456 150 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Sediminibacterium Sediminibacterium sp.
31326854 31326854 PRJNA793147_P_NODE_4135_length_917_cov_2.713443_g3932_i0 PRJNA793147 4135 917 2.713443 24.88227231 Bacteroidota 976 Bacteria Bacteria 211 2.44e-63   NR RYG06432.1 1869212 g3932 i0 40.8 9.93565976008724 284 152 92.9 5 19 870 3 270 RYG06432.1 MAG: purine-nucleoside phosphorylase [Chitinophagaceae bacterium] diamond 9111 211 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
31507700 31507700 PRJNA793147_P_NODE_59816_length_228_cov_0.905660_g59550_i0 PRJNA793147 59816 228 0.90566 2.0649048 Mucilaginibacter ginsenosidivorans 398053 Bacteria Bacteria 90.5 8.17e-20   NR WP_147031243.1 398053 g59550 i0 55.3 2 76 34 100 0 228 1 59 134 WP_147031243.1 class I SAM-dependent methyltransferase [Mucilaginibacter ginsenosidivorans] diamond 456 90.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Mucilaginibacter Mucilaginibacter ginsenosidivorans
31823667 31823667 PRJNA793147_P_NODE_17377_length_403_cov_2.071856_g17111_i0 PRJNA793147 17377 403 2.071856 8.34957968 Vicingus serpentipes 1926625 Bacteria Bacteria 175 2.89e-49   NR WP_147099270.1 1926625 g17111 i0 64 1.03473945409429 139 45 99.8 2 402 1 105 243 WP_147099270.1 T9SS type A sorting domain-containing protein [Vicingus serpentipes] diamond 417 175 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Vicingaceae Vicingus Vicingus serpentipes
31855361 31855361 PRJNA793147_P_NODE_39777_length_267_cov_1.414141_g39511_i0 PRJNA793147 39777 267 1.414141 3.77575647 Segetibacter sp. 2231182 Bacteria Bacteria 42.4 0.0173   NR MDB5193873.1 2231182 g39511 i0 34.8 0.51685393258427 46 30 51.7 0 56 193 2 47 MDB5193873.1 hypothetical protein [Segetibacter sp.] diamond 138 42.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Segetibacter Segetibacter sp.
31896197 31896197 PRJNA793147_P_NODE_41617_length_261_cov_2.020833_g41351_i0 PRJNA793147 41617 261 2.020833 5.27437413 Bacteroidota 976 Bacteria Bacteria 45.1 0.0066   NR WP_177761665.1 2748319 g41351 i0 37.7 1.58620689655172 61 37 70.1 1 194 12 253 312 WP_177761665.1 acetylornithine carbamoyltransferase [Flavobacterium sp. I3-2] diamond 414 45.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. I3-2
32803418 32803418 PRJNA793147_P_NODE_1740_length_1453_cov_3.151012_g1637_i0 PRJNA793147 1740 1453 3.151012 45.78420436 Flavobacterium collinsii 1114861 Bacteria Bacteria 52.4 0.0025   NR WP_395341608.1 1114861 g1637 i0 26.7 0.594631796283551 288 156 53.3 14 481 1254 47 309 WP_395341608.1 hypothetical protein [Flavobacterium collinsii] diamond 864 52.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium collinsii
32897789 32897789 PRJNA793147_P_NODE_1360_length_1625_cov_5.061054_g1271_i0 PRJNA793147 1360 1625 5.061054 82.2421275 Emticicia sp. 17c 3127704 Bacteria Bacteria 389 2.11e-122   NR WP_337045214.1 3127704 g1271 i0 53.8 0.655384615384615 355 156 64.4 4 1595 549 27 379 WP_337045214.1 hypothetical protein [Emticicia sp. 17c] diamond 1065 389 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Leadbetterellaceae Emticicia Emticicia sp. 17c
32897795 32897795 PRJNA793147_P_NODE_33960_length_288_cov_1.611872_g33694_i0 PRJNA793147 33960 288 1.611872 4.64219136 Bacteroidota bacterium 1898104 Bacteria Bacteria 42.4 0.0455   NR MBU0696299.1 1898104 g33694 i0 38.3 0.625 60 37 62.5 0 98 277 72 131 MBU0696299.1 hypothetical protein [Bacteroidota bacterium] diamond 180 42.4 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;