RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA793147" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA793147 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28768226 28768226 PRJNA793147_P_NODE_47507_length_244_cov_1.411429_g47241_i0 PRJNA793147 47507 244 1.411429 3.44388676 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 78.6 2.05e-15   NR XP_004830506.1 1537102 g47241 i0 49.4 2.88934426229508 79 40 97.1 0 4 240 167 245 XP_004830506.1 hypothetical protein BEWA_002470 [Theileria equi strain WA] diamond 705 79 0.994936708860759 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
29737676 29737676 PRJNA793147_P_NODE_62870_length_222_cov_2.405229_g62604_i0 PRJNA793147 62870 222 2.405229 5.33960838 Cryptosporidium ryanae 515981 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0287   NR XP_067198006.1 515981 g62604 i0 32.4 1 74 48 97.3 1 217 2 125 198 XP_067198006.1 uncharacterized protein FG386_002536 [Cryptosporidium ryanae] diamond 222 42.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ryanae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;