RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA793147" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 3 ✖

bioproject 1

  • PRJNA793147 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12257307 12257307 PRJNA793147_P_NODE_33890_length_288_cov_2.191781_g33624_i0 PRJNA793147 33890 288 2.191781 6.31232928 Bacteria 2 Bacteria Bacteria 190 1.2099999999999995e-55   NR AAX47270.1 271 g33624 i0 100 2.96875 95 0 99 0 287 3 251 345 AAX47270.1 DNA polymerase large fragment, partial [Thermus aquaticus] diamond 855 190 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
15244183 15244183 PRJNA793147_P_NODE_13472_length_466_cov_1.239295_g13206_i0 PRJNA793147 13472 466 1.239295 5.7751147 Bacteria 2 Bacteria Bacteria 297 4.609999999999999e-93   NR 1TAQ_A 271 g13206 i0 98.7 2.99356223175966 155 2 99.8 0 466 2 637 791 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] diamond 1395 297 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
28989579 28989579 PRJNA793147_P_NODE_44568_length_252_cov_1.792350_g44302_i0 PRJNA793147 44568 252 1.79235 4.516722 root 1 Root_unresolved Root_unresolved 167 6.699999999999999e-46   NR 1TAQ_A 271 g44302 i0 98.8 5 84 1 100 0 1 252 251 334 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] diamond 1260 167 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;