RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA793147" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA793147 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14806742 14806742 PRJNA793147_P_NODE_54992_length_232_cov_0.883436_g54726_i0 PRJNA793147 54992 232 0.883436 2.04957152 Halorubrum vacuolatum 63740 Archaea Archaea 131 4.16e-34   NR WP_089383787.1 63740 g54726 i0 75.3 2.98706896551724 77 19 99.6 0 232 2 155 231 WP_089383787.1 4-alpha-glucanotransferase [Halorubrum vacuolatum] diamond 693 131 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum vacuolatum
22455366 22455366 PRJNA793147_P_NODE_54538_length_232_cov_0.883436_g54272_i0 PRJNA793147 54538 232 0.883436 2.04957152 Haloparvum sedimenti 1678448 Archaea Archaea 124 2.49e-32   NR WP_058366639.1 1678448 g54272 i0 75 0.982758620689655 76 19 98.3 0 228 1 237 312 WP_058366639.1 alpha/beta fold hydrolase [Haloparvum sedimenti] diamond 228 124 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloparvum Haloparvum sedimenti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;