RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA793147" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA793147 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28222201 28222201 PRJNA793147_P_NODE_20686_length_366_cov_13.737374_g20420_i0 PRJNA793147 20686 366 13.737374 50.27878884 Candidatus Binatus sp. 2811406 Bacteria Bacteria 43.9 0.0072   NR WP_304820945.1 2811406 g20420 i0 38.5 0.532786885245902 65 37 53.3 1 32 226 12 73 WP_304820945.1 Rdx family protein [Candidatus Binatus sp.] diamond 195 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae Candidatus Binatus Candidatus Binatus sp.
30180060 30180060 PRJNA793147_P_NODE_29212_length_309_cov_1.200000_g28946_i0 PRJNA793147 29212 309 1.2 3.708 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 137 5.8e-37   NR MBU4485457.1 2044594 g28946 i0 66.7 0.990291262135922 102 33 98.1 1 6 308 43 144 MBU4485457.1 UDP-glucose 4-epimerase GalE [Candidatus Delongbacteria bacterium] diamond 306 137 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;