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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA792582" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 16 ✖

bioproject 1

  • PRJNA792582 · 16 ✖

analysis 1

  • diamond · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16518344 16518344 PRJNA792582_P_NODE_38373_length_282_cov_1.382775_g37559_i0 PRJNA792582 38373 282 1.382775 3.8994255 Natrialba hulunbeirensis 123783 Archaea Archaea 171 3.26e-49   NR WP_006653030.1 123783 g37559 i0 92 2.01063829787234 88 7 93.6 0 17 280 291 378 WP_006653030.1 glutamine synthetase family protein [Natrialba hulunbeirensis] diamond 567 171 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrialba Natrialba hulunbeirensis
27022169 27022169 PRJNA792582_P_NODE_15102_length_443_cov_1.178378_g14288_i0 PRJNA792582 15102 443 1.178378 5.22021454 archaeon 1906665 Archaea Archaea 132 1.1999999999999999e-32   NR RYG69809.1 1906665 g14288 i0 48.3 0.968397291196388 143 74 96.8 0 14 442 1082 1224 RYG69809.1 MAG: fibronectin type III domain-containing protein, partial [archaeon] diamond 429 132 1 Archaea               archaeon
27338347 27338347 PRJNA792582_P_NODE_54243_length_246_cov_1.780347_g53429_i0 PRJNA792582 54243 246 1.780347 4.37965362 Halalkalicoccus tibetensis 175632 Archaea Archaea 111 4.28e-30   NR WP_340604604.1 175632 g53429 i0 86.8 0.829268292682927 68 9 82.9 0 41 244 1 68 WP_340604604.1 hypothetical protein [Halalkalicoccus tibetensis] diamond 204 111 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus tibetensis
27843299 27843299 PRJNA792582_P_NODE_32124_length_305_cov_1.327586_g31310_i0 PRJNA792582 32124 305 1.327586 4.0491373 archaeon 1906665 Archaea Archaea 117 6.44e-29   NR RYG65636.1 1906665 g31310 i0 54 0.983606557377049 100 46 98.4 0 301 2 64 163 RYG65636.1 MAG: hypothetical protein EON64_11495, partial [archaeon] diamond 300 117 1 Archaea               archaeon
28042164 28042164 PRJNA792582_P_NODE_51985_length_249_cov_0.875000_g51171_i0 PRJNA792582 51985 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 52 2.23e-5   NR NMB66807.1 2026803 g51171 i0 45.8 1.44578313253012 59 31 69.9 1 1 174 520 578 NMB66807.1 threonine--tRNA ligase [Candidatus Woesearchaeota archaeon] diamond 360 52 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
28633035 28633035 PRJNA792582_P_NODE_22127_length_366_cov_1.897611_g21313_i0 PRJNA792582 22127 366 1.897611 6.94525626 uncultured archaeon 115547 Archaea Archaea 43.5 0.0293   NR QBM02692.1 115547 g21313 i0 35.7 0.459016393442623 56 36 45.9 0 44 211 45 100 QBM02692.1 hypothetical protein [uncultured archaeon] diamond 168 43.5 1 Archaea               uncultured archaeon
29012045 29012045 PRJNA792582_P_NODE_47828_length_256_cov_1.584699_g47014_i0 PRJNA792582 47828 256 1.584699 4.05682944 Methanocorpusculum sp. 2058474 Archaea Archaea 40.8 0.0434   NR HJK45603.1 2058474 g47014 i0 45.9 0.43359375 37 20 43.4 0 171 61 37 73 HJK45603.1 ammonium transporter [Methanocorpusculum sp.] diamond 111 40.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.
29579773 29579773 PRJNA792582_P_NODE_54510_length_246_cov_0.890173_g53696_i0 PRJNA792582 54510 246 0.890173 2.18982558 archaeon 1906665 Archaea Archaea 71.2 3.7e-12   NR RYG69087.1 1906665 g53696 i0 46.2 0.951219512195122 78 42 95.1 0 234 1 1087 1164 RYG69087.1 MAG: hypothetical protein EON64_03605, partial [archaeon] diamond 234 71.2 1 Archaea               archaeon
29737658 29737658 PRJNA792582_P_NODE_52030_length_249_cov_0.875000_g51216_i0 PRJNA792582 52030 249 0.875 2.17875 archaeon 1906665 Archaea Archaea 100 8.39e-24   NR RYG62424.1 1906665 g51216 i0 54.9 0.987951807228916 82 37 98.8 0 248 3 11 92 RYG62424.1 MAG: hypothetical protein EON64_17870, partial [archaeon] diamond 246 100 1 Archaea               archaeon
29927580 29927580 PRJNA792582_P_NODE_22051_length_367_cov_1.112245_g21237_i0 PRJNA792582 22051 367 1.112245 4.08193915 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 44.7 0.0268   NR RMD67877.1 2026773 g21237 i0 25.4 0.931880108991826 114 77 89.1 2 337 11 92 202 RMD67877.1 MAG: ribonuclease Z [Candidatus Pacearchaeota archaeon] diamond 342 44.7 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30022342 30022342 PRJNA792582_P_NODE_48431_length_254_cov_1.701657_g47617_i0 PRJNA792582 48431 254 1.701657 4.32220878 Natronorubrum texcoconense 1095776 Archaea Archaea 128 1.52e-33   NR WP_090306417.1 1095776 g47617 i0 82.1 0.992125984251969 84 15 99.2 0 254 3 32 115 WP_090306417.1 J domain-containing protein [Natronorubrum texcoconense] diamond 252 128 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum texcoconense
30536897 30536897 PRJNA792582_P_NODE_60313_length_233_cov_2.743750_g59499_i0 PRJNA792582 60313 233 2.74375 6.3929375 root 1 Root_unresolved Root_unresolved 57 2.09e-7   NR MCJ7714343.1 2026714 g59499 i0 54.5 1.42918454935622 44 20 56.7 0 67 198 108 151 MCJ7714343.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 333 57 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
31918711 31918711 PRJNA792582_P_NODE_9977_length_537_cov_1.879310_g9173_i0 PRJNA792582 9977 537 1.87931 10.0918947 Marine Group I thaumarchaeote 2511932 Archaea Archaea 52 3.56e-4   NR NWJ99825.1 2511932 g9173 i0 57.6 0.184357541899441 33 14 18.4 0 524 426 28 60 NWJ99825.1 hypothetical protein [Marine Group I thaumarchaeote] diamond 99 52 1 Archaea Marine Group I Thermoproteati Nitrososphaerota         Marine Group I thaumarchaeote
31981887 31981887 PRJNA792582_P_NODE_39358_length_279_cov_1.873786_g38544_i0 PRJNA792582 39358 279 1.873786 5.22786294 Halobacteriales archaeon 1904752 Archaea Archaea 58.5 7.01e-8   NR MCA1812015.1 1904752 g38544 i0 86.2 0.311827956989247 29 4 31.2 0 193 279 3 31 MCA1812015.1 recombinase family protein [Halobacteriales archaeon] diamond 87 58.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon
32235446 32235446 PRJNA792582_P_NODE_55558_length_245_cov_0.895349_g54744_i0 PRJNA792582 55558 245 0.895349 2.19360505 archaeon 1906665 Archaea Archaea 135 6.85e-35   NR RYH29899.1 1906665 g54744 i0 85.2 0.991836734693878 81 12 99.2 0 2 244 507 587 RYH29899.1 MAG: hypothetical protein EON65_06985 [archaeon] diamond 243 135 1 Archaea               archaeon
32266945 32266945 PRJNA792582_P_NODE_36698_length_286_cov_2.028169_g35884_i0 PRJNA792582 36698 286 2.028169 5.80056334 Natrialbaceae archaeon GCM10025896 3252695 Archaea Archaea 105 6.650000000000001e-26   NR MFC6720718.1 3252695 g35884 i0 52.1 2.03496503496504 96 45 99.7 1 1 285 67 162 MFC6720718.1 TATA-box-binding protein [Natrialbaceae archaeon GCM10025896] diamond 582 105 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae   Natrialbaceae archaeon GCM10025896

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;