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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA792582" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 13 ✖

tax_kingdom 1

bioproject 1

  • PRJNA792582 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23730091 23730091 PRJNA792582_P_NODE_56859_length_244_cov_0.900585_g56045_i0 PRJNA792582 56859 244 0.900585 2.1974274 root 1 Root_unresolved Root_unresolved 56.6 4.75e-7   NR WP_012236970.1 56 g56045 i0 43.8 6.70081967213115 73 41 89.8 0 225 7 97 169 WP_012236970.1 serine/threonine protein kinase [Sorangium cellulosum] diamond 1635 56.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
26927207 26927207 PRJNA792582_P_NODE_40182_length_277_cov_1.588235_g39368_i0 PRJNA792582 40182 277 1.588235 4.39941095 Myxococcota bacterium 2818507 Bacteria Bacteria 48.5 5.45e-5   NR MEC8422185.1 2818507 g39368 i0 40.2 0.888086642599278 82 49 88.8 0 26 271 4 85 MEC8422185.1 hypothetical protein [Myxococcota bacterium] diamond 246 48.5 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
27496228 27496228 PRJNA792582_P_NODE_50423_length_250_cov_1.740113_g49609_i0 PRJNA792582 50423 250 1.740113 4.3502825 Sorangium cellulosum 56 Bacteria Bacteria 50.1 7.66e-6   NR KYF55844.1 56 g49609 i0 52.4 0.504 42 17 46.8 1 2 118 32 73 KYF55844.1 hypothetical protein BE08_04980 [Sorangium cellulosum] diamond 126 50.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
27780465 27780465 PRJNA792582_P_NODE_51684_length_249_cov_0.875000_g50870_i0 PRJNA792582 51684 249 0.875 2.17875 Polyangiaceae bacterium 2268199 Bacteria Bacteria 62.4 4.67e-9   NR HWL88207.1 2268199 g50870 i0 50.9 1.26506024096386 55 27 66.3 0 83 247 60 114 HWL88207.1 thiamine pyrophosphate-binding protein [Polyangiaceae bacterium] diamond 315 62.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
28885298 28885298 PRJNA792582_P_NODE_22428_length_364_cov_1.202749_g21614_i0 PRJNA792582 22428 364 1.202749 4.37800636 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 69.7 6.78e-12   NR MRR56327.1 2026735 g21614 i0 69.8 1.1043956043956 43 13 35.4 0 355 227 138 180 MRR56327.1 peptidoglycan-associated lipoprotein Pal [Deltaproteobacteria bacterium] diamond 402 69.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29043450 29043450 PRJNA792582_P_NODE_43248_length_269_cov_1.397959_g42434_i0 PRJNA792582 43248 269 1.397959 3.76050971 Myxococcales bacterium 2026763 Bacteria Bacteria 44.3 0.0153   NR MCA9522042.1 2026763 g42434 i0 34.5 1.6728624535316 84 41 87 3 257 24 879 954 MCA9522042.1 tetratricopeptide repeat protein [Myxococcales bacterium] diamond 450 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29769388 29769388 PRJNA792582_P_NODE_47391_length_257_cov_1.869565_g46577_i0 PRJNA792582 47391 257 1.869565 4.80478205 Polyangiaceae bacterium 2268199 Bacteria Bacteria 43.5 0.0227   NR HEX2870986.1 2268199 g46577 i0 38.5 0.75875486381323 65 34 68.9 2 187 11 158 222 HEX2870986.1 c-type cytochrome [Polyangiaceae bacterium] diamond 195 43.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30653962 30653962 PRJNA792582_P_NODE_61033_length_210_cov_4.058394_g60219_i0 PRJNA792582 61033 210 4.058394 8.5226274 Kofleriaceae bacterium 2212474 Bacteria Bacteria 43.1 0.0172   NR MEO7732607.1 2212474 g60219 i0 45.5 0.628571428571429 44 17 62.9 2 142 11 338 374 MEO7732607.1 hypothetical protein [Kofleriaceae bacterium] diamond 132 43.1 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
31096333 31096333 PRJNA792582_P_NODE_44895_length_264_cov_2.246073_g44081_i0 PRJNA792582 44895 264 2.246073 5.92963272 Cystobacter sp. 1965334 Bacteria Bacteria 42 0.0426   NR MET0405238.1 1965334 g44081 i0 35.8 0.761363636363636 67 43 76.1 0 52 252 9 75 MET0405238.1 hypothetical protein [Cystobacter sp.] diamond 201 42 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter sp.
31285958 31285958 PRJNA792582_P_NODE_35915_length_288_cov_2.330233_g35101_i0 PRJNA792582 35915 288 2.330233 6.71107104 Polyangiaceae bacterium 2268199 Bacteria Bacteria 43.9 0.0242   NR MEB2310536.1 2268199 g35101 i0 63.9 0.375 36 10 36.5 2 254 150 187 220 MEB2310536.1 apolipoprotein N-acyltransferase [Polyangiaceae bacterium] diamond 108 43.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31918700 31918700 PRJNA792582_P_NODE_36217_length_288_cov_0.990698_g35403_i0 PRJNA792582 36217 288 0.990698 2.85321024 Archangium sp. 1872627 Bacteria Bacteria 44.3 0.0167   NR WP_414641468.1 1872627 g35403 i0 34.8 0.927083333333333 89 36 90.6 4 272 12 36 104 WP_414641468.1 RCC1 domain-containing protein, partial [Archangium sp.] diamond 267 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
32140244 32140244 PRJNA792582_P_NODE_54518_length_246_cov_0.890173_g53704_i0 PRJNA792582 54518 246 0.890173 2.18982558 Myxococcales bacterium 2026763 Bacteria Bacteria 99 4.21e-22   NR MCA1826806.1 2026763 g53704 i0 57.3 5 82 35 100 0 1 246 225 306 MCA1826806.1 2-oxo acid dehydrogenase subunit E2 [Myxococcales bacterium] diamond 1230 99 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32803412 32803412 PRJNA792582_P_NODE_60620_length_229_cov_2.833333_g59806_i0 PRJNA792582 60620 229 2.833333 6.48833257 Paraliomyxa miuraensis 376150 Bacteria Bacteria 125 9.74e-34   NR WP_266221121.1 376150 g59806 i0 84.2 0.995633187772926 76 12 99.6 0 229 2 143 218 WP_266221121.1 queuosine precursor transporter [Paraliomyxa miuraensis] diamond 228 125 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales   Paraliomyxa Paraliomyxa miuraensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;