contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA792582" and tax_phylum = "Mycoplasmatota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4605583 | 4605583 | PRJNA792582_P_NODE_58544_length_242_cov_0.911243_g57730_i0 | PRJNA792582 | 58544 | 242 | 0.911243 | 2.20520806 | Mollicutes | 31969 | Bacteria | Bacteria | 133 | 3.4299999999999995e-37 | NR | MBD5445969.1 | 2108 | g57730 | i0 | 77.5 | 3.96694214876033 | 80 | 18 | 99.2 | 0 | 242 | 3 | 83 | 162 | MBD5445969.1 30S ribosomal protein S5 [Mycoplasma sp.] | diamond | 960 | 133 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma sp. | ||
| 19903718 | 19903718 | PRJNA792582_P_NODE_33416_length_298_cov_1.702222_g32602_i0 | PRJNA792582 | 33416 | 298 | 1.702222 | 5.07262156 | Mycoplasmataceae bacterium | 2685873 | Bacteria | Bacteria | 109 | 1.48e-25 | NR | MDK2819925.1 | 2685873 | g32602 | i0 | 59.2 | 3.06040268456376 | 98 | 34 | 98.7 | 1 | 4 | 297 | 190 | 281 | MDK2819925.1 APC family permease [Mycoplasmataceae bacterium] | diamond | 912 | 109 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasmataceae bacterium | |||
| 19903930 | 19903930 | PRJNA792582_P_NODE_51776_length_249_cov_0.875000_g50962_i0 | PRJNA792582 | 51776 | 249 | 0.875 | 2.17875 | Malacoplasma sp. | 2791014 | Bacteria | Bacteria | 81.3 | 1.13e-15 | NR | MCF0217436.1 | 2791014 | g50962 | i0 | 60.3 | 2.20481927710843 | 63 | 25 | 75.9 | 0 | 237 | 49 | 21 | 83 | MCF0217436.1 TROVE domain-containing protein [Malacoplasma sp.] | diamond | 549 | 81.3 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Malacoplasma | Malacoplasma sp. | |||
| 22454497 | 22454497 | PRJNA792582_P_NODE_59218_length_241_cov_0.916667_g58404_i0 | PRJNA792582 | 59218 | 241 | 0.916667 | 2.20916747 | Malacoplasma iowae | 2116 | Bacteria | Bacteria | 103 | 5.879999999999999e-24 | NR | WP_406646931.1 | 2116 | g58404 | i0 | 58.2 | 1.96680497925311 | 79 | 33 | 98.3 | 0 | 239 | 3 | 271 | 349 | WP_406646931.1 amidase family protein [Malacoplasma iowae] | diamond | 474 | 103 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Malacoplasma | Malacoplasma iowae | |||
| 22892911 | 22892911 | PRJNA792582_P_NODE_18418_length_401_cov_1.173780_g17604_i0 | PRJNA792582 | 18418 | 401 | 1.17378 | 4.7068578 | Bacteria | 2 | Bacteria | Bacteria | 104 | 5.94e-24 | NR | MDR2823098.1 | 2685873 | g17604 | i0 | 77.3 | 8.3715710723192 | 66 | 14 | 48.6 | 1 | 130 | 324 | 107 | 172 | MDR2823098.1 type I glyceraldehyde-3-phosphate dehydrogenase [Mycoplasmataceae bacterium] | diamond | 3357 | 105 | 0.990476190476191 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasmataceae bacterium | |||
| 27022189 | 27022189 | PRJNA792582_P_NODE_55662_length_245_cov_0.895349_g54848_i0 | PRJNA792582 | 55662 | 245 | 0.895349 | 2.19360505 | Mycoplasma sp. | 2108 | Bacteria | Bacteria | 49.3 | 1.9e-4 | NR | MBD5446104.1 | 2108 | g54848 | i0 | 34.8 | 1.68979591836735 | 69 | 36 | 84.5 | 2 | 36 | 242 | 959 | 1018 | MBD5446104.1 hypothetical protein [Mycoplasma sp.] | diamond | 414 | 49.3 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma sp. | ||
| 27536930 | 27536930 | PRJNA792582_P_NODE_42843_length_270_cov_1.502538_g42029_i0 | PRJNA792582 | 42843 | 270 | 1.502538 | 4.0568526 | Malacoplasma | 2791001 | Bacteria | Bacteria | 132 | 5.51e-36 | NR | WP_004024704.1 | 2116 | g42029 | i0 | 75.3 | 2.96666666666667 | 89 | 22 | 98.9 | 0 | 269 | 3 | 76 | 164 | WP_004024704.1 50S ribosomal protein L3 [Malacoplasma iowae] | diamond | 801 | 132 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Malacoplasma | Malacoplasma iowae | |||
| 29327363 | 29327363 | PRJNA792582_P_NODE_56509_length_244_cov_0.900585_g55695_i0 | PRJNA792582 | 56509 | 244 | 0.900585 | 2.1974274 | Ureaplasma sp. | 1965234 | Bacteria | Bacteria | 68.9 | 2.06e-11 | NR | MDE5651448.1 | 1965234 | g55695 | i0 | 48.4 | 3.11065573770492 | 64 | 33 | 78.7 | 0 | 208 | 17 | 10 | 73 | MDE5651448.1 aminotransferase class V-fold PLP-dependent enzyme [Ureaplasma sp.] | diamond | 759 | 68.9 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Ureaplasma | Ureaplasma sp. | |||
| 29611291 | 29611291 | PRJNA792582_P_NODE_13550_length_465_cov_1.448980_g12738_i0 | PRJNA792582 | 13550 | 465 | 1.44898 | 6.737757 | Malacoplasma muris | 2119 | Bacteria | Bacteria | 172 | 1.4599999999999999e-46 | NR | WP_412032115.1 | 2119 | g12738 | i0 | 69 | 0.832258064516129 | 129 | 37 | 82.6 | 3 | 58 | 441 | 20 | 146 | WP_412032115.1 PTS transporter subunit IIABC [Malacoplasma muris] | diamond | 387 | 172 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Malacoplasma | Malacoplasma muris | |||
| 32045345 | 32045345 | PRJNA792582_P_NODE_58418_length_242_cov_0.911243_g57604_i0 | PRJNA792582 | 58418 | 242 | 0.911243 | 2.20520806 | Mycoplasmataceae bacterium | 2685873 | Bacteria | Bacteria | 80.5 | 1.79e-15 | NR | MDK2819538.1 | 2685873 | g57604 | i0 | 82.2 | 0.557851239669422 | 45 | 8 | 55.8 | 0 | 181 | 47 | 19 | 63 | MDK2819538.1 PTS sugar transporter subunit IIC [Mycoplasmataceae bacterium] | diamond | 135 | 80.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasmataceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;