RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA792582" and tax_phylum = "Cossaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA792582 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28569610 28569610 PRJNA792582_P_NODE_46467_length_260_cov_1.352941_g45653_i0 PRJNA792582 46467 260 1.352941 3.5176466 Betapolyomavirus macacae 1891767 Viruses Viruses 55.1 2.04e-6   NR AAK29054.1 1891767 g45653 i0 68.9 0.519230769230769 45 14 51.9 0 204 70 493 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 135 55.1 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
30022348 30022348 PRJNA792582_P_NODE_60011_length_237_cov_2.554878_g59197_i0 PRJNA792582 60011 237 2.554878 6.05506086 Betapolyomavirus macacae 1891767 Viruses Viruses 49.3 1.64e-4   NR AAK29054.1 1891767 g59197 i0 68.3 0.518987341772152 41 13 51.9 0 124 2 493 533 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 123 49.3 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
32677297 32677297 PRJNA792582_P_NODE_46220_length_261_cov_0.856383_g45406_i0 PRJNA792582 46220 261 0.856383 2.23515963 Betapolyomavirus macacae 1891767 Viruses Viruses 52 2.58e-5   NR AAK29054.1 1891767 g45406 i0 64.4 0.517241379310345 45 16 51.7 0 216 82 493 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 135 52 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;